Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (374), Expect = 1e-40
 Identities = 94/290 (32%), Positives = 148/290 (51%), Gaps = 7/290 (2%)

Query: 4   KQLRSFVEVIHRGGFTQAGKSLHISQSAVSKQVAQLEQSLGTPLLERTGSHIRLTAAGEV 63
           K L+ F+ ++    FT+A +   I+Q  +SK + +LE+SLG  LL R    + LT AG++
Sbjct: 6   KTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQL 65

Query: 64  VLQRAEAMLRLQTELLSELDDMQQLTRGELRLGL-PLLAGDTLFAGLFAEYRRRYPNVTI 122
               A  +L     L  ++ ++  L  G LRLG+ P+++  +L  GL   YR+RYP V +
Sbjct: 66  FEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMS--SLIIGLLTSYRKRYPGVEL 123

Query: 123 QLLEGGSRTIEQAILNGELDVG--GCLNSSDPAFARQAFCDEPLDALLPMDHPLAQNAQV 180
           Q+ E G    EQA+LN  LD+       + +     Q     PL A LP  HPLA  + +
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYL 183

Query: 181 RLEELADTPFLMYQRSFVLNDRLIQACQQVGFTPREIGRSGQADFLAALVAAGQGVVLLP 240
             ++    PF++Y   F L   + +  ++ G       RSGQ DFLA +V A  G+ +LP
Sbjct: 184 SWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGLAILP 243

Query: 241 SVVARGLLRPGVVRLTLKAPDYLRWDIAFTWREGAYLSKAAQAWLALLRE 290
             + + L    +V   ++    L WD+A  WR+   L+ AA A L L ++
Sbjct: 244 EPICQKLSNSKLVFRPMQPA--LTWDLALIWRQNLPLTPAANALLELSKQ 291