Pairwise Alignments

Query, 228 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 244 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (424), Expect = 1e-46
 Identities = 83/217 (38%), Positives = 133/217 (61%)

Query: 11  LALTLSAYIFSRWIYRRTGRYLLSPLILVPVLLLAVAVPMNTAYAEYSADTHWLMLVLGP 70
           L LTL  Y  ++ +Y+R   + L+P++L PV++  +   ++     Y   THWLM +L P
Sbjct: 26  LLLTLFCYFAAKILYQRHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLMAMLAP 85

Query: 71  VTVAFAVPIWQQRKLLARYWSALLLGMIAGSAASIATSFGLAKALALDPSVALSLVPRSI 130
            T+AFA+PI+++RKL+ +Y   +  G+IAG    + +S+ L K + L   ++ SL+ RS+
Sbjct: 86  ATIAFALPIYRERKLIRQYPLTIAFGVIAGLLLGMVSSWLLVKFVPLPVELSKSLLVRSV 145

Query: 131 TTPFAMPVSSDLGGVPELTAVFVMFTGVFGAMLGGVLLKWLPLRTPLARGALFGVGAHGA 190
           +TPFAM  +   GGVPELTA+ V+ TG+ G ++   L K + +RT L +G   G  AHGA
Sbjct: 146 STPFAMEATGAFGGVPELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVALGASAHGA 205

Query: 191 GVSRAHEVGGEEGSVAGLVMVLTGLLNLFAAPLLAAL 227
           G ++A E+G +EG +A L M+  G+  +  AP  A +
Sbjct: 206 GAAKASELGQQEGVIASLTMIFIGIAMVLGAPFFALI 242