Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 290 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  117 bits (293), Expect = 3e-31
 Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 13/286 (4%)

Query: 6   DLEQMRLFVSVAEHRSFSAVARQQRKAQSAVSNGIAMLEADLGVSLFERSSGRQPRLTEA 65
           +LEQ+  F++  E  SFSA AR   K+QS+VS G+  LE DLGV LF+RS+ + P+LTE 
Sbjct: 3   NLEQLNAFIAAVEKGSFSAAARHIGKSQSSVSIGVNNLELDLGVELFDRST-KYPQLTEQ 61

Query: 66  GSVLLEEAREVLRQCERLNGRALSLTRGEEACLRLAQDEAMLFQPVLDSLEALAGKYPLL 125
           G  L  +A+ ++RQ  R+   A  +    E  L +  D  +       +LE +A K+P  
Sbjct: 62  GERLYHQAKALMRQATRMESYAKGVIEAVEDQLVIGADPLVPMSVFDSALEKMAEKFPFT 121

Query: 126 EVQLSSAAQGDVARKLVERKADLGLLFYHDQIPEALERRVVGSVEMVTVCGVNHPLAKEP 185
            V+L       + R +   + D+G     + +PE L+   +  +E V +C  ++  A   
Sbjct: 122 RVKLVKLTGNHLNRAIEADEVDVGFNIMSEAVPENLDFIGIARIEWVCICSPDYKFADLE 181

Query: 186 YVTCQRLAQFRQLLMST--QTSVYPGSEAASPLVWRADSFYVLAEWLMSGLGWAWLPRHI 243
            V  + L   RQ++ S+  Q          S   W A     +   +  G+GW  +P  +
Sbjct: 182 AVDSEMLINERQIVCSSMLQNEYLAKLGRVSQETWEASDLDDMIRLVEQGIGWGIIPLSM 241

Query: 244 VQYPTYQQQMVELDSEWTP------PALVVELVWRRDEHLGPAARF 283
            +    ++  +   S + P        + V+L+W+    LGPA  F
Sbjct: 242 YE----EKAAIGTLSTFKPVIEKETGLITVDLLWKSTAQLGPAKSF 283