Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 8/290 (2%)

Query: 7   LEQMRLFVSVAEHRSFSAVARQQRKAQSAVSNGIAMLEADLGVSLFERSSGRQPRLTEAG 66
           L+ + +  ++ +  SFSA A    +  SA++  +  LE+DLGV LFER  G++  LT  G
Sbjct: 7   LDGLIVLDAIDKKGSFSAAAESLFRVPSALTYTVQKLESDLGVKLFER-KGQRAELTLVG 65

Query: 67  SVLLEEAREVLRQCERLNGRALSLTRGEEACLRLAQDEAMLFQPVLDSLEALAGKYPLLE 126
            ++L + RE+L    RL      L  G E+ L LA D  +   P+L  +         + 
Sbjct: 66  QLVLRQGREILAATSRLEEAVRQLETGWESTLTLAIDTVVPGLPLLKLIAEFTELGKQVT 125

Query: 127 VQLSSAAQGDVARKLVERKADLGLLFYHDQIPEALERRV-VGSVEMVTVCGVNHPLAKEP 185
           + ++  + G     L   +AD+  +    ++P+     V +G +E V     NHPLA+  
Sbjct: 126 INITEESLGGGWDALYSGRADIA-VGVTGELPKGQYHLVEIGMLEFVFALAPNHPLAQFD 184

Query: 186 Y-VTCQRLAQFRQLLMSTQTSVYPGSEAA---SPLVWRADSFYVLAEWLMSGLGWAWLPR 241
           + +  + L QF  ++++  ++      +    S  V R  +     +    GLG  +LP+
Sbjct: 185 HPIATEALLQFPSVVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVGYLPK 244

Query: 242 HIVQYPTYQQQMVELDSEWTPPALVVELVWRRDEHLGPAARFLAKRFAEC 291
           H++        +V    E   PA  V L WR+   LG A  + A+R   C
Sbjct: 245 HLIGEALAAGTLVACQLEIPRPAQAVFLAWRKGS-LGKAQAWFAERLPHC 293