Pairwise Alignments

Query, 833 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 7e-24
 Identities = 196/906 (21%), Positives = 344/906 (37%), Gaps = 100/906 (11%)

Query: 8   LDRPGFMPRLSAHHLLRPRLAEPLLAAQV-RVKLLCAPAGSGKSALFAECALQAPK---- 62
           L RPG +       ++RPR+ + L  A   ++ L  +PAG GK+ + A+     P     
Sbjct: 26  LTRPGRLHNA----IVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKPNLGWY 81

Query: 63  ------DCPVHWLP--LNGIALSPLDLC---QRLAQNLDLPFIDE--ATLLSDLARWQAP 109
                 + P  ++   L  I  +  + C   Q+LA+      +    + + +++A +   
Sbjct: 82  SIDDSDNDPFRFMNYLLQAINKATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADYHGE 141

Query: 110 AWVFLDDFCRLPAPDTDALLDRLFTASSPA-LTWWLGTRRRPLCNWPRLLLDDELLECGA 168
            +V LDD+  L   +T     R F    P  LT  + +R  P      L + D ++E G 
Sbjct: 142 CYVVLDDY-HLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEIGN 200

Query: 169 DL-AFSPVEIQQLLTHAPGQSVDQVL-----QFSAGWCAGARIALLGDGHPEKTLL---- 218
           +L AF   E  +         +D +       +  GW +  ++  L   H  +TL     
Sbjct: 201 ELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQHRTLAQTIE 260

Query: 219 -----------DYLQHELFSTLPPELAEAWRVLAHLPRFNAGLCEHLFGFGDGDQYLHDL 267
                      DYL  E+F  L  E        + L  F+  L   L G  D    +  L
Sbjct: 261 SVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIESL 320

Query: 268 QALGAFIQPWE-DTEWLQVFPPLADLL---RDEPWPAKRSWHRRAC--QWFTAEQDWQAA 321
              G FI P E +T W +     A+ L   R    P +    +RA    W  A    Q A
Sbjct: 321 NRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEAAAPHQ-A 379

Query: 322 FEHALLAEEYEVAVSLLQHFSFEDLFRQQNAMLLLRLHEQHGDELMLGSAQLVGLLTAAL 381
             HA LA++ E+  S+L  + ++ +F Q    +L     Q     +    +L  L     
Sbjct: 380 LRHAHLAQDTELLASILSQYGWK-MFNQGELEVLEAAINQLSPPQLYREPKLCMLQAWLA 438

Query: 382 LFAGRFEQAAQCIQQLARFAPQPTAAKQRYLLARWQAQWGWLLHLGGDAERSREHFLEAL 441
               R+      + + A+                + A    +     + E++ E    AL
Sbjct: 439 QSQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALELAELAL 498

Query: 442 HALPDSAWTSRLMCLSGLTQQALLRGELDVAQGLSREALCLARAHGSLLLEALLELDHAQ 501
             L  + + SR++  S + +   + G L  A  + ++   LAR +          L  ++
Sbjct: 499 SQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWALLQQSE 558

Query: 502 LLEQRGAPYRAQSLLEKVQSMLLKQRLKAGPLVGRIALRQGHLALRQGQDSLAAECFEAG 561
           +L  +G    A  + +    ++ +Q+L   PL   +   +  +     +   A +    G
Sbjct: 559 ILLAQGYVQAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQILWCWNRLDEAEQAAYKG 618

Query: 562 LKMCLHSQDKRVLYGFLGLALLAANRGDYAQAFVQLRDAERLMQQR--QVPDTVYRAVLL 619
           L +  +    + L+ +  LA +A  RG+  +A   +   + L++Q    V  T   ++ L
Sbjct: 619 LSVLENHSQSKHLHCYSMLARIAIGRGELDKAGRFIEQIQHLLKQSTYHVDWTANASLSL 678

Query: 620 LVSGHFWLQQGRAEL-----TVEAVRRVLRHFRGPQAKQAPPATLEL------------- 661
           L+  ++ +++   E+     +     +   HF   Q +    A ++L             
Sbjct: 679 LL--YWQVKENSTEIRQWLQSSTRPDKACNHFSQLQWRNIARAQIQLGELSEARHTLDFI 736

Query: 662 -VPRLEYLLV-----------LAEVRLGGADQPVARLTALLETAHQRGM----LCLETEL 705
                EY LV           L  +  G   Q   +L   L   +Q GM    L   +++
Sbjct: 737 QEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKLKQALRLTNQTGMIGNFLIDGSKI 796

Query: 706 RLVLGEVA--WQVGDCALARRSLQTGLELAARCQVQQAIRELRLRSPGLLSELGMEPQAP 763
             +L ++    ++GD    R  L     L       Q  R +       + +L   P  P
Sbjct: 797 GHLLEKLVHKGELGDLERHRAHL-----LLKEISTTQRSRSIHF-DEEFVEKLVNHPNIP 850

Query: 764 VSGAVESPLSQRELEVLQLIALGNSNLEIADRLFISLHTVKTHARRIHSKLGVERRTQAV 823
                 SPL+QRE +VL LI  G SN +IA  L ++  T+KTH R ++ KL +  R +AV
Sbjct: 851 -ELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHIRNLYQKLNIANRKEAV 909

Query: 824 AKAKTL 829
             A+ L
Sbjct: 910 QTAEQL 915