Pairwise Alignments

Query, 303 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 15/288 (5%)

Query: 1   MNLSLYLLTVLIWGTTWIALKWQLGVVAIPVSIVYRFGLAALVLFALL-LLSRKLQVMNR 59
           +NL   L    IWG +++ ++           I  R G AAL LF +  LL R L +   
Sbjct: 4   VNLLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQH 63

Query: 60  RGHLICLAQGLCLFCVNFICFLTASQWIPSGLVAVVFSTATLWNALNARVFFGQRVARNV 119
             H + L  GL    V F+ F  A+  +    ++++ STA +W A+   ++ G  ++R  
Sbjct: 64  WPHFLIL--GLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKA 121

Query: 120 LMGGGLGLMGLGLLFWPELVG---HAASPQTLLGLGLALLGTLCFSAGNLLSSLQQKAGL 176
           + G  LG+ G+ ++   ++V    HAA P     L  A  G     A N      Q +  
Sbjct: 122 VAGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGL----ATNYTKQAPQLSAF 177

Query: 177 RPLTTNAWGMAYGAAMLATYCVVRGIPFEMDWSARYIGALWYLVIPGSVIGFTAYLTLVG 236
                + W      A L  +  +R  P  ++W     GA+  L +  + + +  Y  LV 
Sbjct: 178 ENAHGSMWAACLWVAPLMWFVPLRETPSSLEW-----GAVILLGVICTGLAYLIYFRLVK 232

Query: 237 RMGPERAAYCTVLFPVVALNVSAYAEGYQWTAPALAGLVLVMVGNVLV 284
            +G       T L PV  +    +          L G +LV+ G +LV
Sbjct: 233 AIGAASTLSVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLV 280