Pairwise Alignments

Query, 507 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

 Score =  456 bits (1172), Expect = e-132
 Identities = 250/514 (48%), Positives = 335/514 (65%), Gaps = 15/514 (2%)

Query: 7   LTTLLPLVADLSRELPEGERYRRLLQAMRALLPCDAAALLRLDGEWLVPLAVDGLSADTL 66
           L+TLL +   L+      ER+ RLL A+R  + CD   L+ L  + L PLA+ GL+ DTL
Sbjct: 6   LSTLLEMTVGLASGANNEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGLTRDTL 65

Query: 67  GRRFKVSEHPRFAVLLSSPGPTRFDSDSELPDPYDGLVDGLHGHLEVHDCMGCPLFVDDQ 126
           GRRF VSEHPR A + S+  P RF +D  LPDP+DGL+      L +H CMG PL   +Q
Sbjct: 66  GRRFVVSEHPRLAQICSADLPVRFAADCPLPDPFDGLLLDSEDDLPMHSCMGLPLHFGEQ 125

Query: 127 PWGLLTLDALDTERFERVELDALQAFASLAAATVNVAERIERLTLRA--------EIYRE 178
             G+LTLD+L  + F+ +   +L+  A++AAAT+ +      L  +A        E+ +E
Sbjct: 126 LLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQE 185

Query: 179 ASGQQHKEMIGQSKPHKRLVEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASTRADKP 238
           A  +   E+IG S P   +  +I +V  S   +LI GETGVGKELVA+ IH  S R  +P
Sbjct: 186 AWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQP 245

Query: 239 LISLNCAALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLTVQAK 298
           L+ +NCAA+PE L+ESELFGHV+GAFTGA   R GKF LA+GGTLFLDE+GEL L+ Q+K
Sbjct: 246 LVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSK 305

Query: 299 LLRVLQSGQLQRLGSDKEHQVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPLQVPAL 358
           +LR LQ+ ++Q +G D+   VDVR++AATNRDL  EV  GR+RAD YHRLSVYP+ VP L
Sbjct: 306 ILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPL 365

Query: 359 RERGRDVLLLAGFFLEQNRSRMGLGSLRLTSDAQAALLAYNWPGNVRELEHLIGRSALKA 418
           RER  D+ LLAG+F+EQ R ++G+  L+L  D  + L+ Y WPGNVRELEH+I R+ALKA
Sbjct: 366 RERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKA 425

Query: 419 LGNCRERPKILSLNAQDL-DLPDVSAPLIEEQTGSAPVV---TGD--LRQATEQYQRQVI 472
               R RP + +L  +DL +L    A ++E      P++    G+  LR AT+++QR +I
Sbjct: 426 KARQRGRP-VTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLI 484

Query: 473 SACLERHQHNWASAARELGLDRANLGRMAKRLGL 506
           S  L +   NWA AAR L  DRANL R+AKRLG+
Sbjct: 485 SETLTQADFNWAEAARRLQTDRANLTRLAKRLGI 518