Pairwise Alignments

Query, 313 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

Subject, 386 a.a., cytochrome o ubiquinol oxidase subunit II from Sinorhizobium meliloti 1021

 Score =  310 bits (795), Expect = 3e-89
 Identities = 154/319 (48%), Positives = 212/319 (66%), Gaps = 16/319 (5%)

Query: 7   PRLLGF---LPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVIIMTF 63
           P LL F   L +L + L++ GC   +M P G I   QR+LI+ +T+LMLL++VPV+ +T 
Sbjct: 2   PELLKFSRRLAVLPLFLVMAGCDMVVMSPSGDIAAQQRDLIVISTILMLLIIVPVVFLTL 61

Query: 64  AFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPLE-- 121
            FAW+YR SNT+ATY P+W HST +E+ +W  P+ IIIALG IT+ STH+LDPYRPL+  
Sbjct: 62  FFAWRYRRSNTSATYDPEWHHSTALEVVIWSAPLAIIIALGAITWISTHKLDPYRPLDRL 121

Query: 122 -------SDVKPINIEVVALDWKWLFIYPDLGIATVNEIQFPENTPLNFRITSDAVMNSF 174
                  +D +P+ +EVVALDWKWLF YPDLG+A VNE+  P + P++F+IT+ +VMNSF
Sbjct: 122 DAERAIPADARPLTVEVVALDWKWLFFYPDLGVAAVNELAAPVDVPIHFKITASSVMNSF 181

Query: 175 FIPALGGQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAISTSQEGFNAWV 234
           +IPAL GQIYAM GM+T+LH + N+  E EG SANYSG GF+ M+FK     ++GF+ WV
Sbjct: 182 YIPALAGQIYAMPGMETKLHAVINKPGEYEGFSANYSGDGFSHMRFKFHGLDRQGFDDWV 241

Query: 235 AEVKAAPKQLDQAEYDALTKPSQNNPVALYSAYEPNLFQKIVDKYEGMKPGKPVKHEKKE 294
           A VKA    L++  Y  L KPS+  PV  Y+A E  L++ I++    + PGK    E   
Sbjct: 242 ARVKAQGTALNRDAYLKLEKPSEREPVRYYAAVEDGLYRAILNLC--VTPGKMCMEEMMH 299

Query: 295 VAAVEGSDTGSHSTAGAEE 313
           +  + G+  G  S    E+
Sbjct: 300 IDMMGGA--GKESAENREK 316