Pairwise Alignments

Query, 111 a.a., multidrug DMT transporter from Pseudomonas simiae WCS417

Subject, 108 a.a., multidrug efflux transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.0 bits (214), Expect = 6e-23
 Identities = 40/102 (39%), Positives = 70/102 (68%)

Query: 3   VAYYYLAIAICSEVIATVSMKAIKGWSTPIPLLLVIVGYGVAFWMLTLVVRTVPVGVAYA 62
           +++ +L + + +E ++ V++KA  G++ PIP ++VI+G+  AF  L   ++ +PVGV +A
Sbjct: 1   MSWIFLLLGVMAEALSHVALKATDGFTRPIPAVMVILGHLTAFIFLGQAMKGMPVGVVHA 60

Query: 63  VWAGMGIVMVSIAALFIYGQKLDIPAMLGMGLIVLGVVVIQL 104
           +WAGM IV V++ +   Y Q LD+ A +GM L+ LGV++I L
Sbjct: 61  LWAGMAIVTVTLLSALFYRQHLDMTAWIGMLLVALGVIMINL 102