Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 260 a.a., extracellular solute-binding protein, family 3 from Synechococcus elongatus PCC 7942

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 16/223 (7%)

Query: 13  ATAVLGLASTAEAGTTLDAIQKKGFIQCGVSDGLPGFGVPDSKGKMTGIDVDVCHAVAAA 72
           A+   G  ++      L+ I+++G++  GV   +      D++G+  G +VD+  ++AA 
Sbjct: 22  ASFFYGANTSGTIAADLETIKRRGYLIVGVQANVAPLSWQDAQGQWQGFEVDLARSLAAE 81

Query: 73  VFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVFTGVTYYDGIGFL 132
           + G+++ V+F  L +++R  AL +  +DL+    T T +R       F+   Y D IG L
Sbjct: 82  LLGNSAAVRFEGLQSRDRLPALLADRVDLLIAQMTVTDARQ--RVAQFSRPYYRDRIGLL 139

Query: 133 VNNKLGVTAAKQLDGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDTADESAKGLEAGR 192
              + G+T  +++      +Q  +   L      R    +   +   +   +   L+ G+
Sbjct: 140 --TRRGITQPQRV----AVLQGSSAIPL-----LRWQAPELALVGVKSYAAAQTALDRGQ 188

Query: 193 CDVLTTDQSGLYAQRIKMAQPDEFVVLPEVISKEPLGPLVRKG 235
            D +  D+  L   +    Q D + +LP+     PL   + +G
Sbjct: 189 VDGIAADRLVLQQWQ---RQSDRYQLLPQQWGDFPLAIALPQG 228