Pairwise Alignments

Query, 337 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 485 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  114 bits (284), Expect = 7e-30
 Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 9/162 (5%)

Query: 180 LAERDALTLVANRYRLEKVLLQECDRAQRFRLPLALIAMDIDDFKSINDRCGHGVGDQTL 239
           +A  D LT  ANR   E+   Q  D+A+  +  ++++ +DID FK +ND  GH VGD  L
Sbjct: 323 MASTDKLTGAANRQVFEEYFHQALDKAKLSQTSISILLIDIDHFKKVNDSYGHSVGDLVL 382

Query: 240 VQVAECLQRCIRPEDLLARWGGDEFVLILPKTSLEIAKTMAANIRLKLK------NSPHR 293
             V   L+  ++P+D+L RWGG+EF+++LP+  L  A  +A   R  +       N  H 
Sbjct: 383 KTVTNLLRSQLKPQDILCRWGGEEFLVLLPEMDLSRAAELAERFRDSISQRELKVNGVH- 441

Query: 294 DDFKVTLSLGVAERQTDEPPAALMVRADQALYRAKAAGKDGV 335
               +T+S+GVAE Q  EP   L+ RAD ALY+AK AG++ V
Sbjct: 442 --IAITVSIGVAEYQKLEPAEDLIKRADLALYQAKEAGRNQV 481