Pairwise Alignments

Query, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 4e-33
 Identities = 87/282 (30%), Positives = 154/282 (54%), Gaps = 28/282 (9%)

Query: 475 VEMAGISTKWSHGDRFAANDLRRSA-------LENDLARQVLREQQAVRARDELVAVVSH 527
           V ++    +  H    A +DLR +        +E D+A++  R Q+A R + E +A +SH
Sbjct: 243 VSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKK--RAQEAARVKSEFLANMSH 300

Query: 528 DLRNPMTVISMLCGMMQQAFSSDGPHTSRRISSAIDTMQQAAGRMNVLLEDLLDTSKIEA 587
           +LR P+  +    G  +Q   +   ++    +  + T++++A  +  ++ D+LD SK+EA
Sbjct: 301 ELRTPLNGV---IGFTRQMLKTQLTNSQ---ADYLQTIEKSANNLLTIINDILDFSKLEA 354

Query: 588 GRYVVRPVSLDVSQMFDEAYSLLAPLAMEKGIDLSFNAEPGLQ--INADPERLFQVLSNL 645
           G+  +  +  +  ++ +E  +L A  A EKG++++   +P +   +  DP R+ QVL+NL
Sbjct: 355 GKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNL 414

Query: 646 IGNAIKFTPRQGNIGISA-----MSSGEEIVFSVRDSGEGIAPEQLPHVFDRYWTQTENN 700
           +GN+IKFT R GNI +S           ++ F VRD+G GI+  Q   +F  + +Q + +
Sbjct: 415 VGNSIKFTER-GNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAF-SQADAS 472

Query: 701 PT----GSGLGLYITQGIVQAHGGKIVAESEVGRGSEFRFTV 738
            +    G+GLGL ITQ +V   GG+I   S + +GS F FT+
Sbjct: 473 ISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTL 514