Pairwise Alignments

Query, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 430 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (317), Expect = 2e-33
 Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 9/244 (3%)

Query: 504 LARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQQAFSSDGPHTSRRISSAID 563
           +AR + R +Q    R E VA VSH+L+ P+TV+     MMQ     D P+     + A+ 
Sbjct: 192 IARDITRIRQLEGMRKEFVANVSHELKTPLTVLQGYLEMMQGMAEPDSPN-----AKAMS 246

Query: 564 TMQQAAGRMNVLLEDLLDTSKIEAGRYVVRPVSLDVSQMFDEAYSLLAPLAMEKGIDLSF 623
            MQQ   RM  ++E LL  S+IE G  V     ++++ + +        LA+ +  +LS 
Sbjct: 247 QMQQQTNRMRSMVEQLLVLSRIEDGSAVNLETKVNMTVLMETLKEEAQALALGQ-YELSI 305

Query: 624 NAEPGLQINADPERLFQVLSNLIGNAIKFTPRQGNIGISAMSSGEEIVFSVRDSGEGIAP 683
            A+PGL +     +L    SNL+ NAI++T   G I I          FSV D+GEGIAP
Sbjct: 306 EADPGLNLYGSEVQLRSACSNLVSNAIRYTEPGGKISIRWKRVPMGAEFSVTDTGEGIAP 365

Query: 684 EQLPHVFDRYW---TQTENNPTGSGLGLYITQGIVQAHGGKIVAESEVGRGSEFRFTVPK 740
           + L  + +R++   +       GSGLGL IT+  +  H   +  ES++G GS F F +P 
Sbjct: 366 QHLTRLTERFYRVDSARSRQSGGSGLGLAITKHALHHHQSDLTIESKLGVGSRFSFIIPN 425

Query: 741 VIDD 744
            + D
Sbjct: 426 HLLD 429