Pairwise Alignments

Query, 304 a.a., preprotein translocase subunit SecF from Pseudomonas simiae WCS417

Subject, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis S2

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 33/277 (11%)

Query: 17  VTVLLTVLALFSWFHKGLNYGLDFTGGTLIELTYEKPADVTLVRSELVKAGYHEAIVQSF 76
           + ++L +L+L      GL   +D +GGT I +      D+++++ +L  +   E  +   
Sbjct: 11  IPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDS---EVKISES 67

Query: 77  GATTDLLVRMPGEDPQLGHQVAEALQKVGGD--NPASVKRVEFVGPQVGEELRDQ----- 129
              T ++++   E         ++++ V  +  N   +  + +   Q+G  L  +     
Sbjct: 68  SIGTFVVIKSGLETD------VDSVRAVVKEFFNVEDLSELSYTEKQIGSVLSSKFWEEG 121

Query: 130 -GGLGMLMALVGIMIYLAFRFQWKFGVGAIVSLIHDVIVTVGILAYFQITFDLTVLAAVL 188
              +G     + I++Y  FR     G   I++   D+ + VG ++ F I      +AA+L
Sbjct: 122 MKAVGFAFIFMAIVVYAIFRTPVPSGA-VILAAASDMAIAVGGMSLFNIPISTATIAALL 180

Query: 189 AIIGYSLNDTIVVFDRVRENFRVLRKATLIENI--NISTTQTLLRTMATSISTLLAIAAL 246
            ++GYS++  I++  RV +     R  TL E I   + T  T+  T   +++ L  +   
Sbjct: 181 MLVGYSVDTDIMLTTRVLKR----RSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTF 236

Query: 247 MIFGGDNLWGFSLALFIGVLAGTYSSIYIANVVLIWL 283
           ++   D L   +  L IG+         I +++L W+
Sbjct: 237 VVPAADVLANIAAVLLIGL---------IGDLMLTWM 264