Pairwise Alignments

Query, 256 a.a., RNA methyltransferase from Pseudomonas simiae WCS417

Subject, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

 Score =  244 bits (624), Expect = 9e-70
 Identities = 125/246 (50%), Positives = 174/246 (70%), Gaps = 8/246 (3%)

Query: 1   MLQNIRVVLVNTSHPGNIGGVARAMKNMGLTRLVLVEPRVFPHHEADARASGANDLLEKA 60
           ML+ ++VVLV T+H GNIG  ARAMK MGL+++VLV+P+     +A A A+GA+++   A
Sbjct: 2   MLERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNA 61

Query: 61  QVVATLEDALVGCNLVLGTSARDRRIPWPLLDPRECGTKVVEEAAGGAEIALVFGREDSG 120
           Q+  TLE A+  C LV+GTSAR R + WP+L+PRECG K++ E A    +A+VFGRE +G
Sbjct: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISE-ANQHSVAMVFGRERTG 120

Query: 121 LTNEELQRCHYHVHIPSDPEFSSLNLGAAVQVLTYEVRMAWLAAAGQPSKVEKEEVASTK 180
           LTN+ELQ CHYHV +P++PE+SSLNL  AVQ+L+YEVRMA+LA       +++   +ST 
Sbjct: 121 LTNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLA-------LQQSSQSSTL 173

Query: 181 SGELATMDELERFYEHLEQTLVAIEFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGIL 240
             E     ELERFY HLEQ ++  EF+  ++P  +M +LRR++ R+     E+NILRGIL
Sbjct: 174 QEEYPRHQELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGIL 233

Query: 241 TETQKA 246
           T  QK+
Sbjct: 234 TSVQKS 239