Pairwise Alignments

Query, 256 a.a., RNA methyltransferase from Pseudomonas simiae WCS417

Subject, 240 a.a., TrmJ/YjtD family RNA methyltransferase from Synechocystis sp000284455 PCC 6803

 Score =  158 bits (400), Expect = 9e-44
 Identities = 98/225 (43%), Positives = 137/225 (60%), Gaps = 5/225 (2%)

Query: 17  NIGGVARAMKNMGLTRLVLVEPRV-FPHHEADARASGANDLLEKAQVVATLEDALVGCNL 75
           N+G +ARAMKNMGL  L+LV PR  +   EA   A  A D+L +A+VV  L  AL     
Sbjct: 8   NVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATALGDRQR 67

Query: 76  VLGTSARDRRIPWPLLDPRECGTKVVEEAAGGAEIALVFGREDSGLTNEELQRCHYHVHI 135
           ++ TSAR+R +  P+  PR+    ++   A   + ALVFGREDSGLTNEEL + H  V I
Sbjct: 68  IIATSARERILQSPMETPRQALPWLL---APNLKSALVFGREDSGLTNEELNQAHRFVRI 124

Query: 136 PSDPEFSSLNLGAAVQVLTYEVRMAWLAAAGQPSKVEKEEVASTKSGELATMDELERFYE 195
           P  P++ SLNL  AV V TYE+  A LA     ++V  + +    +  LAT  +L+ + +
Sbjct: 125 PVHPQYPSLNLSQAVMVCTYELYQASLAMETN-NQVPGDRLEDGSTMPLATNAQLDSYCQ 183

Query: 196 HLEQTLVAIEFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGIL 240
           HLE+TL+ IE L P   R  MA+ RR+Y R++++  E+ +LRGIL
Sbjct: 184 HLEKTLLNIEVLYPHTARSKMAKFRRIYQRAALNSEEVALLRGIL 228