Pairwise Alignments

Query, 256 a.a., RNA methyltransferase from Pseudomonas simiae WCS417

Subject, 245 a.a., RNA methyltransferase TrmH, group 1 from Synechococcus elongatus PCC 7942

 Score =  105 bits (263), Expect = 7e-28
 Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 11/240 (4%)

Query: 4   NIRVVLVNTSHPGNIGGVARAMKNMGLTRLVLVEPRVFPHH-EADARASGANDLLEKAQV 62
           ++R+VLV  +   N+G +AR M N GL+   +V PR   H  EA   A  A  LLE+A +
Sbjct: 2   SLRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVL 61

Query: 63  VATLEDALVGCNLVLGTSARDRRIPWPLLDPRECGTKVVEEAAGGAEIALVFGREDSGLT 122
           V  L  AL GC  V  T+ +      PL  P    T+++     G   AL+FGREDSGL 
Sbjct: 62  VDNLPSALEGCQWVAATTGQRDLRDLPLESP----TQILPWLRQGPA-ALIFGREDSGLQ 116

Query: 123 NEELQRCHYHVHIPSDPEFSSLNLGAAVQVLTYEVRMAWLAAAGQPSKVEKEEVASTKSG 182
             EL     ++  P+DP + SLNL  AV +  Y    A L+ A      ++E   S+ + 
Sbjct: 117 RSELSLAQRYLTFPTDPAYPSLNLAQAVGLCCY--HYACLSEADSRGVPQQE---SSPAA 171

Query: 183 ELATMDELERFYEHLEQTLVAIEFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGILTE 242
             A  ++L  +   LE  L+ + +L        M ++R +  RS+++  E+ +LRG++ +
Sbjct: 172 VRAAFEQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQ 231