Pairwise Alignments

Query, 382 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

 Score =  412 bits (1059), Expect = e-120
 Identities = 207/359 (57%), Positives = 264/359 (73%), Gaps = 3/359 (0%)

Query: 4   STVKTNLLGLTQPEMEKFF-DSIGEKRFRAGQVMKWIHHFGVDDFDAMTNVSKALRDKLK 62
           +T K NLL   +  +  FF + +GEK FRA QVMKWI+HFG DDFD M N++K LR+KLK
Sbjct: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61

Query: 63  AIAEVRGPEVVSEDISSDGTRKWVVRVASGSCVETVYIPQGKRGTLCVSSQAGCALDCSF 122
           A  E+R P V     S+DGT KW +RV     VETVYIP+  R TLCVSSQ GCAL+C F
Sbjct: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120

Query: 123 CSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVISA 182
           CST +QGFN NL  +E+IGQVW A +  G    T  R ITNVVMMGMGEPLLN  N+I A
Sbjct: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180

Query: 183 MHLMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDALRNQLVPINKK 242
           + +M+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND LR++++PIN +
Sbjct: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240

Query: 243 YPLKMLLESCQRYMATLGEKR-VLTIEYTLLKDINDKVEHAVEMIELLKDTPCKINLIPF 301
           + ++  LE  +RY+A+    R  +T+EY LL  +ND  EHA E+ ELLK TPCKINLIPF
Sbjct: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300

Query: 302 NPFPHSGYERPSNNAIRRFQDQLHQAGYNVTVRTTRGEDIDAACGQLVGQVMDRTRRSE 360
           NP+P S Y++PSN+ I RFQ  L Q  + VT+R TRG+DIDAACGQLVG V+DRT+R++
Sbjct: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359