Pairwise Alignments

Query, 252 a.a., pilus assembly protein PilW from Pseudomonas simiae WCS417

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 2/140 (1%)

Query: 40  YVQLGLGYLQQGMSEHAKVPLKKALELDSDDPDANGALALVFQAQAEPELAEQYFHKALA 99
           +V  G   L+ G+   +     KAL +D ++ +A   L  V       + A + + K+L 
Sbjct: 62  WVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLN 121

Query: 100 ARPADPRLLNNYGSFLFEQTRYDQAALYFQQASTDTLYPERSRVFENLGVTSMRLGQRDS 159
               +     N G  L    RY +A   F ++ +  +  + S V+ N G T  +LG+ + 
Sbjct: 122 IDSENSEAWKNKGITLNNMQRYSEAIDCFDKSIS--INAKNSDVWYNKGETQFKLGEYEK 179

Query: 160 ARQHLEKALHLNGRQPRALL 179
           +     KAL ++ +   ALL
Sbjct: 180 SIDSYNKALLIDEKMETALL 199



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 109 NNYGSFLFEQTRYDQAALYFQQASTDTLYPERSRVFENLGVTSMRLGQRDSARQHLEKAL 168
           N+ G  L+ Q  Y  +   +  A  +   P+ + ++ N G + ++LG    + +  +KAL
Sbjct: 29  NDKGLELYNQGNYVDSISEYNLALLEN--PKSAEIWVNKGNSLLKLGIYGESTECFDKAL 86

Query: 169 HLNGRQPRALLEMAELSYEDRHYVPARDYYERFSLLSGQNARS 211
            ++     A   +  +  +  +Y  A + Y++   +  +N+ +
Sbjct: 87  LIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEA 129