Pairwise Alignments

Query, 252 a.a., pilus assembly protein PilW from Pseudomonas simiae WCS417

Subject, 262 a.a., type IV pilus biogenesis/stability protein PilW (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (340), Expect = 8e-37
 Identities = 86/249 (34%), Positives = 129/249 (51%), Gaps = 1/249 (0%)

Query: 1   MPLRLALLLLVTGLAAGCVSSGHESPLQTGK-GREEARVAYVQLGLGYLQQGMSEHAKVP 59
           + L +AL LLVTG       SG + P+   K  +  A    +QLGL YL +G SE AK  
Sbjct: 8   LSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGNSEQAKYN 67

Query: 60  LKKALELDSDDPDANGALALVFQAQAEPELAEQYFHKALAARPADPRLLNNYGSFLFEQT 119
           L KA+E   +  D + A+A  +Q   +    EQ +  A+  + A    +NN+G FL +Q 
Sbjct: 68  LDKAVEYAPELEDVHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFGVFLCQQK 127

Query: 120 RYDQAALYFQQASTDTLYPERSRVFENLGVTSMRLGQRDSARQHLEKALHLNGRQPRALL 179
           RYD+A   F  A     Y   +  +ENLG+ S   GQ + ARQ+ + AL  + R+  +LL
Sbjct: 128 RYDKAEKMFLAAIEMPKYTRTASSYENLGICSRDAGQTEKARQYFQMALKYDPRRSVSLL 187

Query: 180 EMAELSYEDRHYVPARDYYERFSLLSGQNARSLLLGVRLATVHEERDTAARFGQQLERLY 239
           E+AEL  E   YV A++   R+  ++ Q   SL LG+++     +     RFG  L   +
Sbjct: 188 ELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFGILLLAKF 247

Query: 240 PGTPEYQQY 248
           P +P+ +QY
Sbjct: 248 PASPQAKQY 256