Pairwise Alignments

Query, 327 a.a., Cro/Cl family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 2e-37
 Identities = 102/349 (29%), Positives = 170/349 (48%), Gaps = 43/349 (12%)

Query: 10  AANRVNPGDTLRQARESNGWSLAEVALKLNLTTTSLGNLEAGAFDKLPGHTFARGYIRAY 69
           A  +V PG  L+Q RE  G +  ++A +L L  + + ++E   F+     TF RGY+R+Y
Sbjct: 21  AIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSY 80

Query: 70  AKLLGIDQAILVQEFDQ-FTGTDSQGSNVHGLGRIEEPVRVSHTILRIVSLLLLIAVIGG 128
           AK +GI ++ ++  FD  +        ++    + +   ++  + + +++ ++L  ++G 
Sbjct: 81  AKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSK-KTKRQLHDSRIMLITWVILAVIVGM 139

Query: 129 GFVWW--QDQASQRTKDLTSNAMEHV-EVESADGTT-------QIHPLDEPEDQAVAEGQ 178
             +WW    Q +    D T+ A   + +++S++  +        + PL+E +D A A  +
Sbjct: 140 STLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEE 199

Query: 179 A--------------LPEAP----VATEQPAAPETAPAATAAAPTPATPAAPVAQTPA-- 218
           A               P AP    V T++P   ETA A       P  PA P  QTP   
Sbjct: 200 APMSQESLSGEASELTPPAPNEADVVTDKPVVEETAAA-------PVAPAQPQGQTPVQS 252

Query: 219 -APVQA-PATPAPAAPVAPAISPPTAPALIAGDGRVQITFIADCWTQVTDGNGKVLFSGL 276
            APV A P T   AAP AP  S P + +  +    + + F ADCW QV D  GK L +G+
Sbjct: 253 QAPVAAAPVTQPEAAPSAP--SQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGV 310

Query: 277 KRKGDTLDQGGKPPLTLRLGFARGAQVAYNGQPVDVAPFTTGETARLKL 325
           K+ G ++   G+ P  L LG   G  +    +PVD++ +T+G+ ARL L
Sbjct: 311 KKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTL 359