Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas simiae WCS417

Subject, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  515 bits (1327), Expect = e-151
 Identities = 266/358 (74%), Positives = 304/358 (84%), Gaps = 2/358 (0%)

Query: 1   MHGESPIKRRVSRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR 60
           M  ESPIKRR S +I+VG VP+G  APIAVQSMTN+ T DVAATVAQI  LE  G DIVR
Sbjct: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62

Query: 61  VSVPDMDAAEAFGRIKQLVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVRA 120
           VSVP M+AAEAF  IKQ V VPLVADIHFDY+IAL+VAE GVDCLRINPGNIG E R+R+
Sbjct: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122

Query: 121 VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESALRHVEHLERLNFQDFKVSV 180
           VVD ARD+GIPIRIGVN GSLEKDLQ KYGEPTP ALVESA+RHV+ L+RLNF  FKVSV
Sbjct: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182

Query: 181 KASDVFMAVEAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL 240
           KASDVF+AV++YRLLAK+I QPLHLGITEAGG R+G+VKSAVGLGMLLAEGIGDT+RISL
Sbjct: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242

Query: 241 AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNDLELRLEDLLVPLDV 300
           AADPVEE+KVG+DILKSLR+RSRGINFIACPSCSRQ FDV+ T+N LE RLED+L P+DV
Sbjct: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302

Query: 301 AVIGCVVNGPGEAKEAHVGLTGGT-PNLIYIDG-KPSQKLTNDNLVDELEKLIREKAA 356
           ++IGCVVNGPGEA+ +H+GL G    +  Y DG +  ++  ND+LV +LE  IR KAA
Sbjct: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAA 360