Pairwise Alignments

Query, 383 a.a., dehydrogenase from Pseudomonas simiae WCS417

Subject, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

 Score =  236 bits (601), Expect = 1e-66
 Identities = 132/378 (34%), Positives = 204/378 (53%), Gaps = 7/378 (1%)

Query: 12  LLALAVLA--AGCSSNSKKELPPAELTSFKEEVVLQKQWSRSIGDGQGETYNMLVPAIDG 69
           L+A  VLA  AGC+S  +  +  A L   K E   +  WS S+GDG G  ++ L P    
Sbjct: 9   LVAAGVLALLAGCASEEENVIM-APLPIVKSEFTPKTLWSASVGDGVGHYFSKLAPDYAY 67

Query: 70  DNIVAADVTGVVISMDRMNGDVKWKKDLELP----VSGAVGVGYGMVMLGTLKGEVVALD 125
           D +  A   GVV ++D  NG V W  DLE+     +SG +   +G + +G+  G V ALD
Sbjct: 68  DKVFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALD 127

Query: 126 SSTGEEKWRARVTSEVLAPPATNGDIVVVQTQDDRVIGLDASTGEQRWLYDSTPAVLTLR 185
           + TGE  W + +  EVLA PA + +IV+V T    +I L+   G Q+W   +    LTLR
Sbjct: 128 AETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLR 187

Query: 186 GTSGPIVTNNLAVAGLSTGKVVALDTQNGVPAWETRVAIPQGRSELDRVVDIDGGLLLSG 245
           G S P         G  +G++ A   + G   W+  V  P+G +E+DR+VD+D   L+ G
Sbjct: 188 GDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIG 247

Query: 246 ETLYVATYQGRVAALDLQSGRVNWQRDASSYAGVAQGFGSVYVSLASGTVESVDERSTTA 305
            TL+   + G++ A+DL+SG+  W+R+ SS   +A     +Y+      + +VD RS T 
Sbjct: 248 GTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTE 307

Query: 306 LWSNDSLARRQLSAPEVFSSYVAVGDFEGYLHLLSQVDGRFVGRERIDSDGLRARPLVVG 365
           LWSN  L  R L+AP++   Y+ VGD EGYLH + +  G F+ ++ ++  G    PL + 
Sbjct: 308 LWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLVNDSGFAVGPLALN 367

Query: 366 NMLYVYGNSGKLEALTIK 383
           +   +   +G+++ LTI+
Sbjct: 368 DGYVIVTRNGQIKKLTIQ 385