Pairwise Alignments

Query, 559 a.a., 2-isopropylmalate synthase from Pseudomonas simiae WCS417

Subject, 523 a.a., 2-isopropylmalate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 6e-30
 Identities = 129/523 (24%), Positives = 222/523 (42%), Gaps = 50/523 (9%)

Query: 40  LRDGNQSLIEPMDAVKKLRFWKTLVAVGVKEIEASFPAASQTDFDFVRTLIEDNHIPEDT 99
           LRDG Q+L   +   +KL+   +L  +GV  +E  FP +S  DF+ V+T+       +++
Sbjct: 12  LRDGEQALAASLTVKEKLQIALSLERLGVDVMEVGFPVSSPGDFESVQTIARTI---KNS 68

Query: 100 TIQVLTQGREDLIARTFESLRGAKKAIVHLYNATSPSFRRIVFNQDKEGIKAIAVNAAKL 159
            +  L +  E  I    +SL  A++  +H + +TS         +  + +  +AV A   
Sbjct: 69  RVCALARALEKDIDAAAQSLSVAEQFRIHTFISTSTIHVESKLKRSFDQVLDMAVGA--- 125

Query: 160 FVKYAAQQPETQWTFEYSPETFSATELEFAKEVCDAVIEVWNPTPEHKMILNLPATVECA 219
            VKYA +  +     E+S E    T ++    + +A I+    T      +N+P TV   
Sbjct: 126 -VKYARRFTDD---VEFSCEDAGRTPIDNLCRMVEAAIKAGAKT------INIPDTVGYT 175

Query: 220 TPNIYADQIEWFGRHINRRDSVIISLHTHNDRGTGVAATELGLMAGADRVEGCLFGNGER 279
            P+ +   I+     +   D  +IS+H H+D G  VA +   +  GA ++E  + G GER
Sbjct: 176 VPSEFGGIIQNLFDRVPNIDQAVISVHCHDDLGLSVANSITAVQHGARQIECTVNGIGER 235

Query: 280 TGNVDLVTVALNMYTQ----GLDPQLDFSDIDGVRKVVEECNQIQVHPRHPYVGDLVHTA 335
            GN  L  +A+ + T+    GL+  ++  +I     +V +   + V      VG    T 
Sbjct: 236 AGNCSLEEIAMIIATRKASLGLETGINAKEIHRTSNLVSQLCNMPVQANKAIVGANAFTH 295

Query: 336 FSGSHQDAIRKGFSQQKDDALWEVPYLPIDPADIGRSYEAVIRVNSQSGKGGIAYLL--- 392
            SG HQD + K           +  Y  + P  IG +    + + S+SG+  I + +   
Sbjct: 296 SSGIHQDGVLKS----------QNTYEIMTPESIGLNRNN-LNMTSRSGRHVIKHRMEEM 344

Query: 393 ---EQEYDISLPRRMQIEFSQVVQAETDRVGLEMTAPQIYALLQREYLQANTPYALVSHR 449
              EQ+YD+     +   F ++   +      ++ A  +Y   Q E         LV H 
Sbjct: 345 GYGEQDYDMD---TLYEAFLKLADKKGQVFDYDLEA-LVYVEAQAEDENHYGLQQLVVHS 400

Query: 450 LQEENGNSFVEVEVSGKGQGETNLHWKGKGNG----ALEALVAGLPIGVEIMDYNEHAIG 505
                G +   V +S  G+  T       GNG    A +A+       + I  Y   A G
Sbjct: 401 -DSTQGQATATVTLSIDGKAVTE---AATGNGPVDAAYKAIARASGCEINISSYQLSAKG 456

Query: 506 AGTNAKAAAYIELRVNGERPVHGVGIDENITTASFKALFSALN 548
            G +A     I  + + ++  HGVG+  ++  AS  AL   +N
Sbjct: 457 QGQDALGQVDITAKYH-DQSFHGVGLATDVVEASAAALIHVMN 498