Pairwise Alignments

Query, 559 a.a., 2-isopropylmalate synthase from Pseudomonas simiae WCS417

Subject, 386 a.a., homocitrate synthase family protein from Methanococcus maripaludis S2

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 85/361 (23%), Positives = 155/361 (42%), Gaps = 46/361 (12%)

Query: 40  LRDGNQSLIEPMDAVKKLRFWKTLVAVGVKEIEASFPAASQTDFDFVRTLIEDNHIPEDT 99
           LRDG Q+        +KL   K L  + +K+IEA FP  S+ +   ++++       E  
Sbjct: 25  LRDGEQTPGVCFAGDQKLEIAKKLDELKIKQIEAGFPIVSENERKAIKSITG-----EGL 79

Query: 100 TIQVLTQGREDLIARTFESLRGAKKAIVHLYNATSPSFRRIVFNQDKEGIKAIAVNAAKL 159
             Q+L   R  ++    +         +  + ATSP   +   +++ + ++ + + A   
Sbjct: 80  NAQILALSR--VLKEDIDKAIECDVDGIITFIATSPMHLKYKLHKNLDEVEEMGMKA--- 134

Query: 160 FVKYAAQQPETQWTFEYSPETFSATELEFAKEVCDAVIEVWNPTPEHKMI-LNLPATVEC 218
            V+YA           +S E  + T LE        +I +     EH    +++  T+ C
Sbjct: 135 -VEYAKDHG---LFVAFSAEDATRTPLE-------DIIRIHKNAEEHGADRVHIADTLGC 183

Query: 219 ATPNIYADQIEWFGRHINRRDSVIISLHTHNDRGTGVAATELGLMAGADRVEGCLFGNGE 278
           ATP           +H+ +     I +H HND G  V  +  GL+ GA  V   + G GE
Sbjct: 184 ATPQAMYHICSELSKHLKKAH---IGVHCHNDFGFAVINSIYGLIGGAKAVSTTVNGIGE 240

Query: 279 RTGNVDLVTVALNM-----YTQGLDPQLDFSDIDGVRKVVEECNQIQVHPRHPYVGDLVH 333
           R GN  +  +A+ +     +  GL+ ++    +  + K+VE  ++I++    P VG++V 
Sbjct: 241 RAGNAAIEEIAMALKVLYDHDMGLNTEI----LTEISKLVENYSKIKIPENKPLVGEMVF 296

Query: 334 TAFSGSHQDAIRKGFSQQKDDALWEVPYLPIDPADIGRSYEAVIRVNSQSGKGGIAYLLE 393
              SG H DA+ +            + Y P  P  IG+  + ++     SG   +A+ L+
Sbjct: 297 YHESGIHVDAVLEN----------PLTYEPFLPEKIGQKRKIIL--GKHSGCRAVAHRLQ 344

Query: 394 Q 394
           +
Sbjct: 345 E 345