Pairwise Alignments

Query, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

Subject, 588 a.a., ABC-type multidrug transport system, ATPase and permease components from Xanthomonas campestris pv. campestris strain 8004

 Score =  305 bits (782), Expect = 3e-87
 Identities = 205/593 (34%), Positives = 322/593 (54%), Gaps = 23/593 (3%)

Query: 4   SSPSASPSSLKIYFRLLS---YVRPYAGLFALSILGFLIFASTQPMLGYILKYFVDGLSN 60
           S P A P+ L+    L +   +V+   GLFA  ++   + ++    L   +K  +D    
Sbjct: 2   SQPPAKPAPLRKLGNLRTLWPFVQRQRGLFAAWLVALAVSSAATLSLPAAVKRMIDH--- 58

Query: 61  PEAVLFPSVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFN 120
                     F    Q+ QA  LL   +A    L +    Y +A +   +V DLR +L+ 
Sbjct: 59  ---------GFSGGTQINQAFALLFA-VAVVLALATAARFYFVALLGEKVVADLRGRLYA 108

Query: 121 NLLTLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWR 180
           +L+ L   + D   SG L+SR++ +  ++ G     + V +R  +TVI     L   + R
Sbjct: 109 HLIGLDAGFHDRSRSGELVSRLSADSELLRGVVGTTMSVALRSSVTVIGSLVMLFVTSPR 168

Query: 181 LTLVMIAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYE 240
           L    +  +PL  + +   +++ +K S+  Q  + D   +A+ET+   R V++   E YE
Sbjct: 169 LAGFTLIGIPLAVLPIVLGARRLQKISRASQDRVADANTLAAETLGAVRTVQAHAREGYE 228

Query: 241 EKRFLKASQSNTNKQLRMTRTGAIYTPALQLVIYTAMAVLMFLVLY--LRGDASAGDMVA 298
             RF +A Q+         RT A  T    ++I+ A+  +++L  +  + G  + G +  
Sbjct: 229 SNRFSQALQAAIGTARVRIRTQATVTAVAIMLIFGAIVAVLWLGAHDVIAGQMTPGTLGQ 288

Query: 299 YITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEVEVDRGTIERD---KVSGRLD 355
           ++  A +    +  L+EV + +Q+   G   I E LDE+  +      +     V G + 
Sbjct: 289 FVLYALIGGGSVGALAEVWNELQRAAGGMGRIGELLDEQSAIVAPATPQPLPVPVRGAIH 348

Query: 356 VRNLNFTYPGT-ERHVLKDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILL 414
              + F YP   +   L       +PG+ +ALVG SG+GKST+ +++ RF+   SG + +
Sbjct: 349 FDQVVFHYPQRPDMPALDGFDLHVQPGETVALVGPSGAGKSTVLAMLLRFHDPLSGSVRI 408

Query: 415 DGIEIENYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLAGAPRAEVEAAAADANAKDF 474
           D +++     + LR+ IA V Q  TLF+ +  +NI YG L  A  A+VEAAA  A A  F
Sbjct: 409 DDVDLRQTDPVLLREQIALVPQQPTLFAASAADNIRYGRL-DASDAQVEAAATAAEADIF 467

Query: 475 IDQLPKGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAA 534
           +  LP+G+ +++GE G  LSGGQ+QR+AIARALLK+AP+L+LDEATSALD +SER +Q A
Sbjct: 468 LRALPQGYASELGERGTRLSGGQQQRVAIARALLKDAPILLLDEATSALDAQSERAVQQA 527

Query: 535 LDKVMQGRTTLVIAHRLSTIEKADLILVMDDGRIVERGTHGELLAQNGYYARL 587
           LD++MQGRTTLVIAHRL+T+ KAD I+VMD GRIV +GTH +L+A+ G YA L
Sbjct: 528 LDRLMQGRTTLVIAHRLATVLKADRIVVMDAGRIVAQGTHAQLVAEGGLYAEL 580