Pairwise Alignments

Query, 480 a.a., trehalose PTS system, EII-BC components TreB (from data) from Pseudomonas simiae WCS417

Subject, 479 a.a., PTS maltose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  461 bits (1185), Expect = e-134
 Identities = 228/472 (48%), Positives = 329/472 (69%), Gaps = 9/472 (1%)

Query: 4   DYSTIAREILENLGGSDNLEQAAHCVTRLRLALKDPSLVNSSALNQVDLVKGSFFTGGLF 63
           DY  IA+++LE+LGG  N++  AHC TRLRL L D + +N SA+  +  VKG F   G +
Sbjct: 2   DYPVIAKQLLESLGGKSNIQALAHCATRLRLVLNDETQINESAIESLQGVKGQFKVAGQY 61

Query: 64  QVVIGPGEVEKVYAALREQTGLAAATIADVKKKGADKTNAMQRLVRVFSDVFMPILPALI 123
           Q++ G G V +VYA + + TGL   +  DV   GA+K N  QR V+  SD+F+PI+PA++
Sbjct: 62  QIIFGSGIVNQVYAEMAKLTGLVEMSTNDVASAGAEKQNWAQRAVKGLSDIFVPIIPAIV 121

Query: 124 IAGLLMGVNNLMGAQGMFIEGKTLLEAYPNLDGLWSLINLMANTSFVFLPALVGWSAAKR 183
             GLLMG+ N++ A G+FIEG++L++A P L  L S+IN  AN  FV+LP L+ +SA+++
Sbjct: 122 AGGLLMGLFNVLTAPGLFIEGQSLIDANPGLADLASMINTFANAPFVYLPVLLAFSASRK 181

Query: 184 FGGSEILGIVLGLMLVHPDLLNAWNYGKA-VAGLDGQSLPYFDIFGWFKIEKVGYQGQIL 242
           FGG+  LG  LG+++VHPDLLN W +G A V+G    ++P ++I G F+IEKVGYQG +L
Sbjct: 182 FGGNPFLGAALGMLMVHPDLLNGWGFGSASVSG----TVPTWNILG-FEIEKVGYQGSVL 236

Query: 243 PILMAAYVMSVIEKGLRARVPNAIQLLVVPITTIVVTGVLALAIIGPVTRHLGILITEGV 302
           P+L++AY+++ IE GLR  VP+ +  L+ P+  I +TG L   ++GP+TR +G ++ + +
Sbjct: 237 PVLVSAYILAKIENGLRKIVPSVVDNLLTPMLAIFITGFLTFTVVGPLTRDVGFMLGDAL 296

Query: 303 VTLFDLAPMVGGAIFGLLYAPLVITGMHHMFLAVDLQLIS---TQGGTFIWPMIVMSNLA 359
             L+D A  VGGA+FG +YAP VITGMHH F+A++ QL++   T GGTFI+P+  MSN+A
Sbjct: 297 NWLYDSAGFVGGALFGFIYAPFVITGMHHSFIAIETQLLADIVTTGGTFIFPIAAMSNIA 356

Query: 360 QGSAALAVFYTTRNARDKSMASTSAISAYFGITEPAMFGVNLRFKFPFYAALVGSALGSI 419
           QG+AALAV   T+  + K +A  S ++A  GITEPAMFGVNL+ ++PF AA+ G+AL S 
Sbjct: 357 QGAAALAVGVMTKETKLKGVAIPSGVTALLGITEPAMFGVNLKLRYPFIAAICGAALASA 416

Query: 420 FLALNKVQASAIGVGGLPGFISIVPQSIAVFVIGMVIAMVVPFVLTCGLSMK 471
           F+ L  V+A A+G  GLPG ISI PQ I  +++GM I+ V  F LT  L+M+
Sbjct: 417 FITLFNVKAQALGAAGLPGIISINPQQIGYYIMGMAISFVAAFALTVLLAMR 468