Pairwise Alignments

Query, 406 a.a., D-trehalose outer membrane porin (from data) from Pseudomonas simiae WCS417

Subject, 521 a.a., porin from Pseudomonas fluorescens FW300-N2E3

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 110/444 (24%), Positives = 169/444 (38%), Gaps = 96/444 (21%)

Query: 25  FAGYLRSGA--GTSTGSGPQQCFQLPGAQTKY---RLGNECEQYAELELRQDL------- 72
           F GY RSG       G G    +  P         RLGNE + Y  ++L +++       
Sbjct: 111 FNGYARSGLLIDEGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMRIDLSKEIYAQNGTR 170

Query: 73  ----LTLDDGSVLSVDAMAS--------LYNKYDRALKFQGENNGSARMPQMYAQWSNLP 120
               +++ DG   S D  A         ++   D    F+G                  P
Sbjct: 171 SKFTVSIADGVESSNDWTADESKLNVRQVFTALDHVAAFKGN-----------------P 213

Query: 121 SLNGGSLWAGRRYYKRN-DIHISDFYYWNQSATGGGIEDVLI---------------GDL 164
                +LWAG+R+ + N DIH  D      + TGGGI D+ +               GD 
Sbjct: 214 VFENATLWAGKRFDRDNFDIHWLDSDVVYLAGTGGGIYDMQMNKNWRSNYSLIGRSYGDF 273

Query: 165 KY--------SYAISRKDNLYQKEYATRHDFNVAGFKTNPGGELELGLSYIEKAGGRDTN 216
                     SY ++   N + ++   +  FN  G K N  G      +   KAG     
Sbjct: 274 SQGGINADVASYILT--SNQFFEDGQWQWMFNGIGAKKNDFG------TRTNKAGLTPAE 325

Query: 217 SGWALTAQHVQKPFLG--GKNKFALQYGEGPGTGLGYTGNTF-LDKSSKSYRAVEFFDWQ 273
           SG      + QK F G  G  K AL YG+G G  +   G+   L   +++ R   + +  
Sbjct: 326 SGLHSMLANHQKNFFGREGFFKTALLYGQGLGAEVKNVGSDGELIDDARALRLALYGETP 385

Query: 274 VTP--RFGGQIEAVYQKDIRPGSQDQTWMSLGVRPAYAISEQFKLVTEL----------G 321
           + P  R G  + A   KD      D  W++L VR A  I+  F++  E+          G
Sbjct: 386 LAPDWRIGPSLLAEQSKDRYVKGDDYRWLTLNVRLANTINSNFEMAYEMSWQTMNLDPKG 445

Query: 322 HDQVDATGGTRKLSKFTFAPTWSPKGPEFWARPEVRLYYTYATWNKAAKRAANELAAGSA 381
           + Q +A  G     KFT APT+     +   RPE+R++ +Y  W+    R +   + G  
Sbjct: 446 YLQRNAVDGN--FWKFTVAPTFKLDVGDLLTRPELRVFASYMNWSSDLDRYSTSDSFGKT 503

Query: 382 LSDTGSYGTARHGSNVGVQVEYWW 405
             + G           G+Q+E W+
Sbjct: 504 DFNAGGIW------QYGIQMETWF 521