Pairwise Alignments

Query, 406 a.a., D-trehalose outer membrane porin (from data) from Pseudomonas simiae WCS417

Subject, 430 a.a., Maltoporin (phage lambda and maltose receptor) from Pseudomonas stutzeri RCH2

 Score =  234 bits (596), Expect = 5e-66
 Identities = 157/420 (37%), Positives = 208/420 (49%), Gaps = 49/420 (11%)

Query: 20  AQALEFAGYLRSGAGTSTGSGPQQCFQLPGAQTKYRLGNECEQYAELELRQDLLTLDDGS 79
           A A++F GYLRSG G + G G Q CFQ  GA  KYRLGNECE YAE+ L Q++ +  + S
Sbjct: 26  ALAVDFHGYLRSGVGATAGGGDQACFQAAGAPAKYRLGNECETYAEIGLGQEVWSEGNRS 85

Query: 80  VLSVDAMASLYNKYDRALKFQ--------GENN-----GSARMPQMYAQWSNL-PSLNGG 125
              VD+M +   + D+   ++        GENN     G+  + Q      NL PSL G 
Sbjct: 86  FY-VDSMIAY--RSDQGNDWEAGGTDTNGGENNPFDEAGTTSIRQFNVVGKNLIPSLPGA 142

Query: 126 SLWAGRRYYKRNDIHISDFYYWNQSATGGGIEDVLIGDLKYSYAISRK---DNLYQKEYA 182
           ++WAG+RYYKR+D+HI+D+YYW+ S  G GIED+ +G  K S A  R    D +YQ    
Sbjct: 143 AIWAGKRYYKRHDVHINDYYYWDVSGPGAGIEDIDLGFAKASVAWIRNTDGDWVYQGSGT 202

Query: 183 TRH------DFNVAGFKTNPGGELELGLSY--------IEKAGGRDTNSGWALTAQHVQK 228
             +      DF +A    NPGG+LE+G  Y         E+  G     G  +T +H Q 
Sbjct: 203 GTNLANDTLDFRLAEIDVNPGGKLEIGYDYGKANLTDEQERDPGYQDQKGHLVTLEHTQS 262

Query: 229 PFLGGKNKFALQYGEGPGTGLGYTGNTFLDKSSKSYRAVEFFDWQVTPRFGGQIEAVYQK 288
            + GG NK ALQYG     G     NT  +   K +R V      +T         +Y+ 
Sbjct: 263 DWFGGYNKLALQYGTDGIIGSSGRNNTG-NSDGKMFRLVNQGVVGLTDNIEMMYVQIYED 321

Query: 289 DIRPGSQDQTWMSLGVRPAYAISEQFKLVTELGHDQVDATGG---TRKLSKFTFAPTWSP 345
                   QTW S GVRP Y  S+      E G+D+VD       +R L K T A  WS 
Sbjct: 322 RDFDNDSGQTWASFGVRPVYKWSDVMSTALEFGYDRVDPQADGERSRDLKKLTLAQQWS- 380

Query: 346 KGPEFWARPEVRLYYTYATWNKAAKRAANELAAGSALSDTGSYGTARHGSNVGVQVEYWW 405
            G  FWARP++R++ TYA W+    +AA+E        D G       G   GVQ E WW
Sbjct: 381 AGNSFWARPQIRVFATYAKWDGGRYQAASESI------DAGD----DDGITFGVQAEAWW 430