Pairwise Alignments

Query, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

Subject, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

 Score =  339 bits (870), Expect = 1e-97
 Identities = 194/474 (40%), Positives = 286/474 (60%), Gaps = 20/474 (4%)

Query: 9   PRCAKWLIATGLFLMLSACVDKP-STLERIKEDGVLRVVTRNSPATYFQDRNGETGFEYE 67
           P  A WL    L L+      +P S LE+I+E GVLRV T N+P +Y+   +G TG +YE
Sbjct: 9   PIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYE 68

Query: 68  LVKRFADDLGVKLEIETADNLDDLFGQLGKPNGPV-LAAAGLVSSEQRQTQVRFSHPYLE 126
           L + FA +LGVKLE++ A  L  LF  L   NG V + AAGL  SE+R    R    Y  
Sbjct: 69  LAREFAKELGVKLEMKPAYRLSSLFPAL--KNGEVDIIAAGLSQSEERLKDFRAGPAYYY 126

Query: 127 VTPQIIYRNGQSRPTNAADLVGKKIMVLKGS-----------THAEQLAELKKQN-PAIE 174
           V+ Q++Y+ G  RP +   LV ++  +LK +           +H E     K+Q  P  +
Sbjct: 127 VSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQ 186

Query: 175 YEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLGNASNQSWAVAAG 234
           +      +V DLL+ V +G++  T+ DS EV+++Q  +P +  AF+L      SW +   
Sbjct: 187 FHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRS 246

Query: 235 EDNSLLNEINSYLDKVEKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPKYEKHFR 294
           +D SL   +  +   ++++G L  L+++Y GH+    YV    F + L  RLP++   F+
Sbjct: 247 DDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQ 306

Query: 295 AYAKAEKVDWRLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGVSNRLDPKQSIM 354
            Y+   + DWRL+AA+ YQES W P   S TGVRGLMMLT  TA+++GVS+RLDP+QSI 
Sbjct: 307 KYSA--EFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIR 364

Query: 355 GGAKYLAKIKDELDDSIAEPDRTWFALAAYNVGTGHLEDARTLAKREGLNPNKWLDVKKM 414
           GG +YL ++ + + DSI+E ++ WFALA+YN+G GH+ DAR L K +G +P+ W DVK  
Sbjct: 365 GGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDR 424

Query: 415 LPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYY-DILTWVTQPQL-EGNQVVE 466
           LP+L QK+++++TRYGYARG E  ++V NIRRYY  I+  + Q QL  G++ +E
Sbjct: 425 LPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIE 478