Pairwise Alignments

Query, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 20/231 (8%)

Query: 41  GVLRV-VTRNSPATYFQDRNGETGFEYELVKRFADDLGVKLEIETADNLDDLFGQLGKP- 98
           GVL V +T   P   + +     GF+ +L+K  A+++G+K E +  +     +G   +  
Sbjct: 36  GVLTVGITPEMPPQQYYEDGELKGFDIDLMKEIANNMGLKPEFKIYE-----YGGAHEAL 90

Query: 99  -NGPVLAAAGLVSSEQRQTQVRFSHPYLEVTPQI-IYRNGQSRPTNAADLVGKKIMVLKG 156
            NG +     +  S +R+  + FS  Y++    + ++ N   R     DL GK I V+  
Sbjct: 91  LNGEIDCLPSMTISPERKEDMDFSRAYIQTYVVVAVFENSPYRELK--DLNGKNIAVVT- 147

Query: 157 STHAEQLAELKKQNPAIEYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAM--NQVYFPN 214
           +T+ E  A+    +     +  D+VE   L+  V  G ID  + D  ++     Q  F +
Sbjct: 148 NTYTEDWAKEYLGSLNANIKSYDSVE--GLVSDVYSGNIDAVVTDQIQLDYYSKQNNFES 205

Query: 215 VRVAFDLGNASNQSWAVAAGEDN-SLLNEINSYLDKVEKNGTLQRLKDRYY 264
            R+ F+    + + WA+A  +DN +L NEIN  L ++++N  L  LK+++Y
Sbjct: 206 -RLIFE--KMTIEYWAIAVKKDNHNLQNEINDVLFELDENKALYELKNKWY 253