Pairwise Alignments

Query, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

Subject, 243 a.a., polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein from Klebsiella michiganensis M5al

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 12/222 (5%)

Query: 47  TRNSPATYFQDRNGETGFEYELVKRFADDLGVKLEIETADNLDDLFGQLGKPNGPVLAAA 106
           T N P      +N  TGF+ +L       + V+ +  T    D L   L       + A 
Sbjct: 29  TANPPFETVSGKNQPTGFDIDLANALCKQMQVECKF-TPQGFDTLIPALRFKKFDAVIA- 86

Query: 107 GLVSSEQRQTQVRFSHPYLEVTPQIIYRNGQSRPTNAADLVGKKIMVLKGSTHAEQLAEL 166
           G+     R+ QV FSHPY +    ++     +  T  ADL  KK+ V+KG+ H   L + 
Sbjct: 87  GIEVIPMREKQVAFSHPYRQALSGVVVTAKDAAHT-FADLKDKKLGVVKGTLHQHYLRDK 145

Query: 167 KKQNPAIEYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAM----NQVYFPNVRVAFDLG 222
           +K   A+ Y+  ++      LR + EG I   + D   +      N  Y      A D G
Sbjct: 146 QKAVHAVPYDSDESA-----LRALKEGVISGVMGDQETLTKWLQDNPDYAMMDERATDPG 200

Query: 223 NASNQSWAVAAGEDNSLLNEINSYLDKVEKNGTLQRLKDRYY 264
               Q       +D  LLN +N+ LD V+ +   Q ++ +++
Sbjct: 201 YYGKQYAIAVRKDDPELLNNLNAALDVVKASPEFQAMEQKWF 242