Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 485 a.a., PTS system, glucose-specific IIBC component (RefSeq) from Shewanella amazonensis SB2B

 Score =  275 bits (702), Expect = 4e-78
 Identities = 173/470 (36%), Positives = 263/470 (55%), Gaps = 33/470 (7%)

Query: 3   QHFIEGLQRLGRALMLPIAILPIAGLLLRLGDT------DLLNIAVMHDAGQAIFANLAL 56
           +H+    QRL + L++PIAILP AG+++ +         D+ N+ +M   G+ IF  + +
Sbjct: 17  RHWFRFAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANV-LMLSVGKLIFDIMPM 75

Query: 57  IFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKV------MDTSINMG---MLAGIASG 107
           +FAI +A+GF RD  G A  + A GY V++STL        + + I  G   +  GIA G
Sbjct: 76  LFAIAVAIGFCRDQ-GIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGG 134

Query: 108 LMAGGL----YNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVIFGLIWPPIQHGINS 163
           ++ GG+        + ++LP   +FF GRR  P++     + L V+   IWPP+   I  
Sbjct: 135 MLVGGITCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVMLAFIWPPLALSIER 194

Query: 164 FGVLLMESGSLGAFVF-GVFNRLLIVTGLHHILNNMAWFVFGSFTDPVTGAVVTGDLTRY 222
                +      AF F G+  RLL+  GLHHI N   +   G +     G +V G++ RY
Sbjct: 195 LSDWAVYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAHD--GEIVRGEMARY 252

Query: 223 FAGDPKGGQFMTGMFPVMLFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVTEP 282
           FAGDP  G  + G + + ++GLPAA LA++R A   +R  + G+ LS A  S+LTGVTEP
Sbjct: 253 FAGDPSAGN-LAGGYLIKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEP 311

Query: 283 IEFAFMFLAPFLYLIHAVLTGLSMAVTNMLNIHLGFTFSGGFIDMVLGWGKSTNGWLVFP 342
           IEFAF+F+AP LYL HA+LTGL+ ++  +L++H    FS G +D VL + +S+N   ++ 
Sbjct: 312 IEFAFLFVAPLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLFPQSSNTHWIWF 371

Query: 343 VGLAYALIYYSVFNYCIRHFNLKTPGREDTQVVQAEAMSDNQRATAYIQALGGAQNLLSV 402
           +G    +IYY +F   I  FNLKTPGR +    Q       +   A + ALGG  N+  +
Sbjct: 372 LGPLTFVIYYILFRASILAFNLKTPGRFEADTGQ------KRNLIAIVSALGGGGNIADL 425

Query: 403 GACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNGGSLQVVVGPMADSI 452
            AC TRLR+ + D ++     L +LGA  V+  G+G  +Q+V G  A+++
Sbjct: 426 SACLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSG--VQLVFGTKAETL 473



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 489 LNALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLTALGCQGVSQLESGVWHLLIGDKA 548
           ++ALGG GN+  L A  +TRLR+ + D S +    L +LG +GV  + SGV  L+ G KA
Sbjct: 413 VSALGGGGNIADLSA-CLTRLRISVADPSQVDRQRLMSLGAKGVIVVGSGV-QLVFGTKA 470

Query: 549 TGLGEALER 557
             L + L+R
Sbjct: 471 ETLRKLLQR 479