Pairwise Alignments

Query, 412 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 426 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (615), Expect = 3e-68
 Identities = 146/423 (34%), Positives = 235/423 (55%), Gaps = 26/423 (6%)

Query: 1   MDNLPLEPMLAVIALLVLWAALFTAIEAAQQHL--LALRPGTRQGDKAAAR----LSFPR 54
           MD++    + A++A L++ +A F+  E     L    L+     G K A R    L  P 
Sbjct: 1   MDDISTGILFALLACLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPD 60

Query: 55  HSL---ILCNSLCRAAVVILCTLLAIYAWAQNGPWLGWMISCAILLILADYLPRALAVRH 111
             +   ++ N+L       + T++ +  +   G  +       ++L+ A+  P+ LA  +
Sbjct: 61  RLIGLILIGNNLVNILASAIATIIGMRLYGDLGVAIATGALTLVILVFAEVTPKTLAALY 120

Query: 112 PQAVLGFGNTLLGVPLKILYPLAWLLNGISLLLLRPFARKSGVVKKSDEPLPDHDDEPEP 171
           P+ V    + LL + +K+L PL   +N    L+     R  G+  K  +   DH    E 
Sbjct: 121 PERVSYASSVLLTILMKLLSPLVLFVN----LMTNGLIRILGISPKHGKG--DHLSSEEL 174

Query: 172 ESDESRTPGM-PGIHA--------LDNITVNDILVPRSEVDGINLDDSIEEIIEQLRTSQ 222
            +  +   G+ P  H         L+++TVNDI++PR+E+ GIN++D  + I+ QL  S 
Sbjct: 175 RTVVNEAGGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDWKSIVRQLVHSP 234

Query: 223 RTRLPVFHSDINQVQAVLNTRQIQH-LLPDASLTKEALLAACHEPYFVPESTPLQLQLLN 281
             R+ ++   I++V  +L  R+    +L      KE LL A  E YF+PE TPL +QLL 
Sbjct: 235 HGRVVLYRDKIDEVVGILRLREASRFMLEKNDFNKEMLLRAADEIYFIPEGTPLNVQLLK 294

Query: 282 FHKQQRRLGMVVDEYGEVLGIVTLEDILEEIVGEFESEQSAD-NPHIEPQPDGRYIIDGA 340
           F + + R+G++VDEYGE++G+ TLEDILEEIVGEF +  S      I PQ DG ++I+G+
Sbjct: 295 FQRNKERIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADEITPQGDGSFLIEGS 354

Query: 341 ASIRELNKSLNWHLPSDGPKTLNGLVTEALETIPDCAVCLKIGRYRLEILETEDNRVSKV 400
           A+IR++NKSL W LP+DGP+TLNGL+ E LE IP   + +K+ ++++EILE E+NR+  V
Sbjct: 355 ANIRDINKSLKWKLPTDGPRTLNGLILEHLEEIPASHLSVKVAQHKMEILELEENRIKLV 414

Query: 401 LIW 403
            ++
Sbjct: 415 KVY 417