Pairwise Alignments

Query, 412 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  213 bits (542), Expect = 9e-60
 Identities = 139/416 (33%), Positives = 214/416 (51%), Gaps = 16/416 (3%)

Query: 1   MDNLPLEPMLAVIALLVLWAALFTAIEAAQQHL--LALRPGTRQGDKAAAR----LSFPR 54
           MD +    +L  + +L+L++A F+  E A   L    LR     G K A R    L  P 
Sbjct: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60

Query: 55  HSL---ILCNSLCRAAVVILCTLLAIYAWAQNGPWLGWMISCAILLILADYLPRALAVRH 111
             +   ++ N+L       + T++ +  W   G  +   +   ++L+  +  P+ +A  +
Sbjct: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120

Query: 112 PQAVLGFGNTLLGVPLKILYPLAWLLNGISLLLLRPFARKSGVVKKSD----EPLPDHDD 167
           P+ +    + LL    KI   +   +N I+  +LR    KS  +  SD    E L     
Sbjct: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKS--ISSSDALSKEELRTVVH 178

Query: 168 EPEPESDESRTPGMPGIHALDNITVNDILVPRSEVDGINLDDSIEEIIEQLRTSQRTRLP 227
           E      +     +  I  L+ +TV DI+VPRS++  IN++D  + I  Q+  S  TR+ 
Sbjct: 179 EAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVL 238

Query: 228 VFHSDINQVQAVLNTRQIQHLLPDASLTKEALLAACHEPYFVPESTPLQLQLLNFHKQQR 287
           V+   I+     ++ R    L      +K +LL A  E YF+PE TPL +QL NF   + 
Sbjct: 239 VYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298

Query: 288 RLGMVVDEYGEVLGIVTLEDILEEIVGEFESEQSA-DNPHIEPQPDGRYIIDGAASIREL 346
           R+G+VVDEYG++ G+VTLEDILEEIVG+F +   A  +  I  Q DG Y+++ + +IR+L
Sbjct: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDL 358

Query: 347 NKSLNWHLPSDGPKTLNGLVTEALETIPDCAVCLKIGRYRLEILETEDNRVSKVLI 402
           NK + W  P+DGPKTLNGL+ E LE IP     L++  Y LE++E  DN V  V I
Sbjct: 359 NKEMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRI 414