Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

Subject, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  124 bits (312), Expect = 2e-33
 Identities = 82/224 (36%), Positives = 122/224 (54%), Gaps = 21/224 (9%)

Query: 69  KPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVD---MPQLGRPLPKSLSEADVEALLAA 125
           K RS    L+ V+ F+RYL       +D  L+V    M ++   L  SLS  +V+ALL A
Sbjct: 76  KARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLNA 135

Query: 126 PDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQ-GVLRVMGKGSKERLVPMGE 184
           PD     G RDRAML + +A GLRV+EL+ LTL+Q + R    + ++GKG +ER++P+ +
Sbjct: 136 PDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPLWQ 195

Query: 185 EAIVWVERYMRDARSELLGGRPSD---VLFPSLRGEQMTRQTFWHRI-KHQAKVAGIG-- 238
           E    +  +        +  RP +    LF +  G  MTR  F + + KH A    +   
Sbjct: 196 ETAAAIRAW--------IAVRPKNGDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPT 247

Query: 239 ---KALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIY 279
              K++SPH LRH+ A H+L    D+R V + LGH+ L +T+IY
Sbjct: 248 LATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIY 291