Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score =  286 bits (732), Expect = 4e-82
 Identities = 159/302 (52%), Positives = 205/302 (67%), Gaps = 16/302 (5%)

Query: 8   LIDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAWRLEQN 67
           LI+ F++ +WL+ GL+ NT  AYRSDL  F  WL+   + L  AG   I ++L     Q 
Sbjct: 8   LIEEFINTVWLQNGLAQNTLSAYRSDLVQFAKWLK---VPLSAAGEVEISNYLVHLYSQP 64

Query: 68  YKPR--STARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLAA 125
            +P+  S  R +S +R FY +L     I  +P L +++P LG  LPK L+ A VEALL A
Sbjct: 65  IRPKPSSQRRLISVLRRFYGWLFEGHRIQKNPMLTMELPSLGVRLPKVLAMAQVEALLEA 124

Query: 126 PDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEE 185
           PD S A+G RDRA+LEVLYA G RV+EL+ LTL Q+NL  GV+R +GKG+KERLVP+GE 
Sbjct: 125 PDTSTALGLRDRALLEVLYATGFRVSELVGLTLTQLNLDMGVVRTIGKGNKERLVPLGEI 184

Query: 186 AIVWVERYMRDARSELLGGRPSDVLFPSLRGEQ--------MTRQTFWHRIKHQAKVAGI 237
           +  W+ RY+ ++R  LL GR SD LF  + G Q        MTRQ  W  IK   ++ GI
Sbjct: 185 SSDWLVRYLAESRPVLLKGRSSDGLF--ITGHQKKDNNDARMTRQMAWLLIKKYGELVGI 242

Query: 238 GK-ALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHP 296
            +  +SPH LRHAFATHLLN GADLR+VQ+LLGH+D+STTQIYTHVAR RL+++HAKHHP
Sbjct: 243 PRDRISPHVLRHAFATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERLKELHAKHHP 302

Query: 297 RG 298
           RG
Sbjct: 303 RG 304