Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 313 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 8e-28
 Identities = 85/293 (29%), Positives = 132/293 (45%), Gaps = 36/293 (12%)

Query: 59  LDLYALHD---SILEVPKPALLGAFAAAVAGFIILLGYEFSGARYAGVNLPAKTLALGGF 115
           L  ++ H+   SI+ +P   L          +  L  ++    RY G  L    +A+  F
Sbjct: 26  LSQHSFHEIAGSIMRIPARNLFVGIGFVFLSYFCLTLFDTLAIRYVGRKLAYPQIAIASF 85

Query: 116 TAFAIGNAIGLSMLSGGSVRYRLYARHGIGASEVARMTVFASLALGTALPPLAAL----- 170
           T+ +IG+ +G + LS G+VRYR Y+R G+ A EVA++ +F  + +G  L  LA L     
Sbjct: 86  TSLSIGHNVGGAALSSGAVRYRFYSRWGLSAEEVAKVILFCGVTVGLGLVALAGLCFLIV 145

Query: 171 ----ATLSNLPAASTYLHLPQAVLGGIAGAVLLLSAALCIGIYRRRLPEQPYPDNLLVKA 226
               A L+       +L L  A +   AG VLL                  Y     V+ 
Sbjct: 146 PSGAARLTGFSTTGAFL-LGTACIAAAAGYVLL-----------------AYFLRGSVRI 187

Query: 227 GRRTLRLPGRRLTFLQLIITALDVAAAATVLYMLLP--EAPPFGPFLLVYLLALAAGVLS 284
            R T  +P   +  LQ+++   +    +  L+ LL   E   F    + Y+ A    ++S
Sbjct: 188 FRWTFEMPSVGIAALQVVVGVANFLCVSAALHQLLSAFEEVSFIDTAMAYVGAGVTAIVS 247

Query: 285 HVPGGVGVFEAILLAAFADKLGAAPLAAALLLYRMIYVVLPLLIACVFLLVNE 337
           HVPGG+GV EA +    A  LG++    AL+ +R IY  LPL +  + L V E
Sbjct: 248 HVPGGIGVLEATI----AFLLGSSASLGALIAFRAIYFFLPLPLGLISLSVAE 296



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 468 ASRLTELPFSPLYLVASVCVLGASIWLLLFAYQDVPYSHQLWWQFTLDANAPRGLRSLLG 527
           A+RLT    +  +L+ + C+  A+ ++LL AY          W F + +     L+ ++G
Sbjct: 149 AARLTGFSTTGAFLLGTACIAAAAGYVLL-AYFLRGSVRIFRWTFEMPSVGIAALQVVVG 207

Query: 528 AAVVL-VIVSLTWLLRTARPVIHLPTPDELERASKILMASSQPDG 571
            A  L V  +L  LL     V  + T      A    + S  P G
Sbjct: 208 VANFLCVSAALHQLLSAFEEVSFIDTAMAYVGAGVTAIVSHVPGG 252