Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 516 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  224 bits (572), Expect = 8e-63
 Identities = 166/521 (31%), Positives = 255/521 (48%), Gaps = 19/521 (3%)

Query: 29  VSKYRQPIGLAVTLLLFAIALIACRHLLLELDLYALHDSILEVPKPALLGAFAAAVAGFI 88
           ++++ + +G  V L +FA A     H + +  L  +  SI  +P   LL +F   +  ++
Sbjct: 1   MNRHLRSLGSFVVLCIFAGAAWLLYHEVRKYHLADIRQSIELIPDLRLLASFGLMIVNYL 60

Query: 89  ILLGYEFSGARYAGVNLPAKTLALGGFTAFAIGNAIGLSMLSGGSVRYRLYARHGIGASE 148
           IL+GY+    +  G  LP    AL  F   A     G ++L G SVRYR Y+  G    +
Sbjct: 61  ILVGYDALALKAIGRPLPLGKTALVSFVGCACSYNFG-ALLGGSSVRYRFYSAWGFTIPD 119

Query: 149 VARMTVFASLALGTALPPLAALATLSNLPAASTYLHLPQAVLGGIAGAVLLLSAALCIGI 208
           V R+ +  ++        LA L+ +         L LP   +  +  A+L  +    +  
Sbjct: 120 VVRLVLMLAVTFWVGALGLAGLSFVIEPLPLPPGLGLPIDDVRPLGFALLAATTGYLLLT 179

Query: 209 YRRRLPEQPYPDNLLVKAGRRTLRLPGRRLTFLQLIITALDVAAAATVLYMLLPE--APP 266
           +  R P   +          R   LP  ++ F Q +    D+ AAA  LYML+P      
Sbjct: 180 FFVRKPLHFFG---------REFALPCPKIAFAQTLTACADLVAAAGCLYMLMPSDLGLD 230

Query: 267 FGPFLLVYLLALAAGVLSHVPGGVGVFEAILLAAFADKLGAAPLAAALLLYRMIYVVLPL 326
           F  FL VYLLA    VL+HVPGG GVFE ++L+  +       + AALL +R+IY +LPL
Sbjct: 231 FLTFLAVYLLATVVVVLTHVPGGAGVFELVILS-LSQTTHPQAVIAALLAFRVIYYLLPL 289

Query: 327 LIACVFLLVNEAQ-RLFQTQQSLRVASG----LAAPVLAVLVFLSGVVLLFSGATPEIDS 381
           L A + L   E Q R  Q +++ R A      L+  +L+ + F +GV+LL SG+ P    
Sbjct: 290 LFAALLLAGYEVQVRRHQAEKAFRDAGRWMWVLSHILLSYVTFAAGVILLLSGSIPPNKL 349

Query: 382 RLENIGFLIPHRLIDASHFGASLIGVLCLLLAQGLRRRLSAAWMLTMVLLLVGALLSLLK 441
            +     ++P  + +A+H   S+ G   LLL++G+ RRL++ W + + LLL G + +LLK
Sbjct: 350 LIAQSPLVVPPAVQEAAHILGSMAGAGLLLLSRGIERRLASVWKVVVTLLLTGMVCALLK 409

Query: 442 GFDWEEASLMTMTAILLAIFRRSFYRASRLTELPFSPLYLVASVCVLGASIWLLLFAYQD 501
           GFDW EA L++     L   RR FYR S L    +   +  AS  V+G +  + LFA+ D
Sbjct: 410 GFDWHEAVLLSFALAGLLGSRRRFYRKSSLIREEYPLRWFFASAAVIGCAGAVALFAFGD 469

Query: 502 VPYS-HQLWWQFTLDANAPRGLRSLLGAAVVLVIVSLTWLL 541
                  LW   + DA A R +R +  A  V+V  +L  LL
Sbjct: 470 AGTGIRGLWEAISDDAGAARAVRGIAAACAVMVAFTLRRLL 510