Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 850 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  442 bits (1136), Expect = e-128
 Identities = 282/869 (32%), Positives = 457/869 (52%), Gaps = 47/869 (5%)

Query: 36  IGLAVTLLLFAIALIACRHLLLELDLYALHDSILEVPK---PALLGAFAAAVAGFIILLG 92
           I + ++LL+F ++L+   +L  E D Y L+D + EV       L  A A  V  +++L  
Sbjct: 5   IRVIISLLIFTVSLLLLYNL--EQD-YQLNDILAEVKLFSFSQLALAVALTVTSYLMLTL 61

Query: 93  YEFSGARYAGVNLPAKTLALGGFTAFAIGNAIGLSMLSGGSVRYRLYARHGIGASEVARM 152
           Y++   +  G +L  + +A   F AF   N IG S+L+G S+RY+ Y+  G+  +++ ++
Sbjct: 62  YDYLAIKQLGSSLSYQKVAPVSFLAFTFSNTIGFSLLTGTSIRYKFYSELGLTGNQITQI 121

Query: 153 TVFASLALGTALPPLAALATLSNLPAAS-------TYLHLPQAVLG-----GIAGAVLLL 200
            +  S+        +  +A L N PA         T+L     V G     G+ G   L 
Sbjct: 122 VLACSVTFFLGFFFICGIA-LINFPAQQLADLPLPTWLFSLSRVFGVLMLLGVVG-YFLF 179

Query: 201 SAALCIGIYRRRLPEQPYPDNLLVKAGRRTLRLPGRRLTFLQLIITALDVAAAATVLYML 260
           S      IY R     P                P    +  Q +++ LD     T+ Y L
Sbjct: 180 SLLRKKPIYFRGFEFAP----------------PVLSQSLKQFVVSTLDWLVVGTLFYSL 223

Query: 261 LP--EAPPFGPFLLVYLLALAAGVLSHVPGGVGVFEAILLAAFADKLGAAPLAAALLLYR 318
           LP  +   +   L ++ +A A GVL+HVPGG+GVFE+++    +  L    +  ++++YR
Sbjct: 224 LPAVDGLSYLQVLSIFFVANAIGVLAHVPGGIGVFESVVTVTLSQYLPVEQILGSVIVYR 283

Query: 319 MIYVVLPLLIACVF----LLVNEAQRLFQTQQSLRVASGLAAPVLAVLVFLSGVVLLFSG 374
           +IY ++P ++A ++    L++N   +L +    L +   L  P+L++ VF  G+VLL S 
Sbjct: 284 VIYYIVPFMLALIYFVAGLVLNNKDKLSKINIDLHIVRQLLPPLLSISVFSVGLVLLLSV 343

Query: 375 ATPEIDSRLENIGFLIPHRLIDASHFGASLIGVLCLLLAQGLRRRLSAAWMLTMVLLLVG 434
             P I  +   +G ++P  +++ S    S  G+L LLL+ GL +R   A++LT  LLLV 
Sbjct: 344 VNPSIVHKYHWLGEIVPLPIVELSSLILSASGILLLLLSHGLFKRYKKAFILTQKLLLVA 403

Query: 435 ALLSLLKGFDWEEASLMTMTAILLAIFRRSFYRASRLTELPFSPLYLVASVCVLGASIWL 494
            +  +LKG +W+ +  + +  +L+    + FYR   +  + +S  +L++    L   +W+
Sbjct: 404 IVFIVLKGAEWQISLALGLIYLLMLPCEQVFYRQGSIVGVKYSFGWLLSLAAALFLMVWV 463

Query: 495 LLFAYQDVPYSHQLWWQFTLDANAPRGLRSLLGAAVVLVIVSLTWLLRTARPVIHLPTPD 554
           L FAYQDV Y H LW  F+ D++  R LR    A  +L+  ++ ++L   +P        
Sbjct: 464 LFFAYQDVDYDHSLWLTFSQDSHVSRALRGGAIALAILLGFAIRYVLAVRKPHTSRLDSS 523

Query: 555 ELERASKILMASSQPDGGLALTGDKALLFHPNDEAFLMYARRGRSLVALYDPIGPTQQRA 614
            L  A +I+  +    G LAL  DK+LLF+ + +AFLMYAR G   V + DPIG   +  
Sbjct: 524 ALSCAMEIVANAPSSHGYLALVQDKSLLFNEDKDAFLMYARAGHCWVVMGDPIGNPDKFD 583

Query: 615 EMIWQFRDLCDIHHARPVFYQVRAENLPYYMDIGLTAIKLGEEARVDLKRFDLEAKGKEM 674
           +++WQFR+LCD +   PVFYQV  + LP++++ GL+  KLGEEA V L  F+L++   + 
Sbjct: 584 DLLWQFRELCDAYDGWPVFYQVTQKYLPHFLEQGLSLYKLGEEAIVSLAEFELQS--SKY 641

Query: 675 KDLRYTWNRGSRDGLSLEICEPGTAP--MDELKVISDAWLTGKNVREKGFSLGRFSDDYL 732
           + LR +  +  R+GLS ++ +       +  L+ IS +WL  K  REKGFS+G FS  YL
Sbjct: 642 RSLRQSHAKALREGLSFKVVDASEVQSLLPTLEAISTSWLKAKQGREKGFSVGYFSAAYL 701

Query: 733 KHFRIAIIRFEGRPVAFANLLETYNHDLASLDLMRAHPD-APKLTMEFMMVGLIQHYKSH 791
               +A++   G  VAF+N+  +      S+DLMR  P+ +    M+F+   L+   K  
Sbjct: 702 CATPMALVYLNGELVAFSNVWASGAKMEFSVDLMRYLPNLSGSNIMDFLFTELLLWGKQQ 761

Query: 792 GYARFSLGMVPLSGLQPRRGAPLTQRLGSMVFRRGEQLYNFQGLRRFKDKFQPDWEPRYM 851
           GY +F+LGM P+SGL  R   P   +L   V+++G + YNFQGLRR+KDKF P WE +Y+
Sbjct: 762 GYQQFNLGMAPMSGLTDRALVPFWTKLAKTVYKKGNKFYNFQGLRRYKDKFNPRWEAKYL 821

Query: 852 AVPAGLDPLVALADTAALIAGGLTGLVKR 880
               GL   V +     L + G TG+ K+
Sbjct: 822 ICYGGLSLPVVVGSLVTLTSRGATGVFKK 850