Pairwise Alignments

Query, 352 a.a., DNA polymerase IV from Pseudomonas simiae WCS417

Subject, 390 a.a., DNA polymerase IV (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  631 bits (1628), Expect = 0.0
 Identities = 321/349 (91%), Positives = 329/349 (94%)

Query: 1   MTQRKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMS 60
           MTQRKIIHVDCDCFYAAIEMRDDP LA KPLAVGGSADRRGVIATCNYEARAYGVRSAMS
Sbjct: 38  MTQRKIIHVDCDCFYAAIEMRDDPRLAGKPLAVGGSADRRGVIATCNYEARAYGVRSAMS 97

Query: 61  SRHALKLCPDLTIVKPRMEAYKEASKEIQTIFRDYTDLIEPLSLDEAYLDVSDSSHFGGS 120
           S HALKLCPDLTIVKPRM+AY+EASKEI TIF DYTDLIEPLSLDEAYLDVS S+HFGGS
Sbjct: 98  SGHALKLCPDLTIVKPRMDAYREASKEIHTIFSDYTDLIEPLSLDEAYLDVSASAHFGGS 157

Query: 121 ATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSQLRV 180
           ATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVS L V
Sbjct: 158 ATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSALPV 217

Query: 181 SKLHGVGKVTADKLARLGIEDCLQLREWNKLALVREFGSFGERLWSLARGIDDRVVQNDS 240
           SKLHGVGKVTADKL RLGI DCLQLR+W+KLALVREFGSFGERLWSLARGID+R+V NDS
Sbjct: 218 SKLHGVGKVTADKLNRLGIVDCLQLRQWDKLALVREFGSFGERLWSLARGIDERLVHNDS 277

Query: 241 RRQSISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQT 300
           RRQSISVENTYDVDLPDL SCL KLPELMETL+GRMARIDSSYR GKPFVKVKFHDFTQT
Sbjct: 278 RRQSISVENTYDVDLPDLVSCLDKLPELMETLSGRMARIDSSYRPGKPFVKVKFHDFTQT 337

Query: 301 TLEQAGAGRDLESYQQLLTQAFNRGGKPVRLLGIGVRLLDLSNGNEQLE 349
           TLEQAGAGRDL SYQ LLTQAFNRGGKPVRLLGIGVRL DL  G EQLE
Sbjct: 338 TLEQAGAGRDLGSYQLLLTQAFNRGGKPVRLLGIGVRLEDLRGGFEQLE 386