Pairwise Alignments

Query, 352 a.a., DNA polymerase IV from Pseudomonas simiae WCS417

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  265 bits (676), Expect = 2e-75
 Identities = 153/342 (44%), Positives = 209/342 (61%), Gaps = 8/342 (2%)

Query: 4   RKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRH 63
           RKIIH+D D FYA++E RD+P L  KP+AVG   + RGV+A  +YEAR +GV SAM S  
Sbjct: 17  RKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSVT 75

Query: 64  ALKLCPDLTIVKPRMEAYKEASKEIQTIFRDYTDLIEPLSLDEAYLDVSDSSHFGGSATR 123
           A + CP+L  V  R + Y+  S++IQ IF +YT L+EPLSLDEAYLDV+++      AT 
Sbjct: 76  AKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLATE 135

Query: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSQLRVSKL 183
           IA++IR R+  + H+T SAGV+ NKFLAK+ASD +KP+GLFVITP    DFV  L V K 
Sbjct: 136 IAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKF 195

Query: 184 HGVGKVTADKLARLGIEDCLQLREWNKLALVREFGSFGERLWSLARGIDDRVVQNDSRRQ 243
           HGVG  TA+K+ RLGIE    L+  +   L + FG  G   + +ARGID+R V+ D  R+
Sbjct: 196 HGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRK 255

Query: 244 SISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQTTLE 303
           SI  E+T+  D+ DL +  A L  L++ +        S  R     +KVK+ DFTQ T  
Sbjct: 256 SIGAEDTFREDVHDLETARAGLKPLIDKVWHYCEA--SGIRGKTMTLKVKWADFTQITRS 313

Query: 304 QA-----GAGRDLESYQQLLTQAFNRGGKPVRLLGIGVRLLD 340
           +       +  ++    +LL        K +RLLG+ +  LD
Sbjct: 314 KTIVAPIASVAEMSEIAELLLSPIFPAPKGIRLLGVTLSSLD 355