Pairwise Alignments

Query, 510 a.a., permease from Pseudomonas simiae WCS417

Subject, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (552), Expect = 8e-61
 Identities = 148/494 (29%), Positives = 252/494 (51%), Gaps = 76/494 (15%)

Query: 5   TWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYA 64
           +W   + +Y     L + +LG A+G P++L+ S ++ WL++AG++R  IGY   +   YA
Sbjct: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68

Query: 65  FKWVWSPLLDQWRLPLL-GKLGRRRSWLVLAQSLVILGLIGMGFCDPQKHLSWLIAIAVI 123
             ++W+PL+D+ +LP+L   LG+RRSW+   QS+V++  + +   +P  +L      A+ 
Sbjct: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128

Query: 124 VAFASATQDIAVDAYRLEIADDSRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGF- 182
           +A ASATQD+AVDA+R++    S    L          A+ +A  G   +  G+   G+ 
Sbjct: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQ--------ASAMAVVG---WWTGYSLPGYF 177

Query: 183 ---NYKHSAWTGTYVLFGVLMVPALLTTLFMREPNVPLRTQLQAGRYSFAHQLVSVFVLI 239
              N     W G Y +   ++   +L TL + EP+   R QLQ                 
Sbjct: 178 AFVNADSIGWNGVYYIMAGVVGLLMLFTLLVGEPHTQ-RDQLQ----------------- 219

Query: 240 VLLVSVPAMFTQLFNTDFESVLFQGVSLWDLLMEDRAFLRAILYITLTSLCLSAMGRRGL 299
                      QL     + V+   V  W               +T+T            
Sbjct: 220 -----------QLAEERHQQVVSNPVLSW---------------LTVT------------ 241

Query: 300 APVLTPVNDFILRYRWQ-ALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIAGVSKI 358
             VL P  DF  R  ++ AL LL  +  +++ +  +G M+  FY + GF+ +QI   SK+
Sbjct: 242 --VLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKL 299

Query: 359 FGLIMTLLGAGMGGLLIVRFGILPILFIGGVASAGTNLLFVMLADMGPDLQMLIFTISLD 418
            G  +T+L   +G L+ ++FGI+  L IGG+A A +NL+F  +A +GP+  + + T+ +D
Sbjct: 300 LGWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVD 359

Query: 419 NFSSGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFG-YHNFF 477
           NF+S  +T AFV++L+ +T   FSATQYALL+S+  L    I  +SG + +    +  FF
Sbjct: 360 NFTSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFF 419

Query: 478 LITCMLGVPTLVLI 491
           ++T ++ +P+L+++
Sbjct: 420 ILTAVMVIPSLIML 433