Pairwise Alignments

Query, 1008 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  636 bits (1641), Expect = 0.0
 Identities = 369/1023 (36%), Positives = 602/1023 (58%), Gaps = 24/1023 (2%)

Query: 1    MKFTDVFIRRPVLAMVVSLLIVLLGFQAYSTLPLRQYPSMENALITVTTAYPGANAETIQ 60
            M  +DV ++RPV A+V+S+L+ + G  +++ L +R+ P +E+ +++V+T Y GA+A  I+
Sbjct: 1    MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIE 60

Query: 61   GYITQPLQQSLASAEGIDYMTSVSRQNFSVISIYARIGSNSDRLFTELLAKANEVKNKLP 120
              IT  L+  LA   GID +TSVSR   S I++   +G + +   +++       +  LP
Sbjct: 61   SQITSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLP 120

Query: 121  QDAEDPVLSKEAADASALMYISFSSGQLSNPQITDYLSRVIQPKLATLPGMAEAEILGNQ 180
            ++A+DP + K      A +YI+ SS ++   Q+TDY+ RV+  + + + G++  ++ G  
Sbjct: 121  EEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGL 180

Query: 181  VFAMRIWLDPVKLAGFGLSASDITDAVRRYNFLSAAGEVKGEFVVTSINANTDLKSAEAF 240
               M + + P  +AG G++ SDI+DA+ + N  S  G+V+ +  V S+      +SAE F
Sbjct: 181  YKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF 240

Query: 241  GAISVKTDGDSR-VLLRDVARVEMGAENYNAISSFGGTPSVYIGIKATPSANPLDVIKEV 299
              + VK   D   + L+DVA V +GAEN N+     G  +V +GI     ANPL+V K V
Sbjct: 241  EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRV 300

Query: 300  RKILPELESQLPPNLKAEIAYDATLFIQASINEVVKTLFEAVLIVIVVVFLFLGALRSVV 359
             + + +++  LP   +  I YD+T+FI+ SI+EV  TLF    +VI+V+++F+G LR+ +
Sbjct: 301  HEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATL 360

Query: 360  IPVITIPLSMIGVLFFMQLMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKTP 419
            IP +T+P+S+I         G+SINL+TL+A++L+IGLVVDDAIVVVENI  HIE G+ P
Sbjct: 361  IPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKP 420

Query: 420  LDAALEGAREIALPVVSMTITLAAVYAPIGFLEGLTGALFKEFALTLAGAVIISGIVALT 479
            L AA +G RE+   V++ T+ L  V+ PI F++G+ G LF EF++ LA AVI S ++ALT
Sbjct: 421  LLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT 480

Query: 480  LSPMMCALLLRHDENPSGLAHRLDRMFDGLKRRYQRMLHGTLNTRPVVIVFALIVLCLIP 539
            L+P++ + LL+ +  P      +DR+F  L+  Y++++   +  R    V  +I  C+  
Sbjct: 481  LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPV--VIAACIGG 538

Query: 540  VF--LKFTQSQLAPDEDQGIIFMIASAPQPTNLEYLNTYTDEFIN-----IFKAFPEYYS 592
             +  ++   +QL P ED+G+IF        T+   +    D         + + F + +S
Sbjct: 539  SYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFS 598

Query: 593  --SFQINGFNGVQSGIGGFLLKPWNERDRTQMQILPEVQKRLEQIPGLQVFGFNLPSLPG 650
              S    G  G Q+G    +L+ WN+R  T  + L +V+K L  IP ++VF F +P   G
Sbjct: 599  IQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPF-MPGFRG 657

Query: 651  TGEGLPFGFVINTANDYESLLEVANRVKKRAMESGKFAFVDIDLAFDKPEVVVDIDRAKA 710
             G   P  FV+   +DY  L   A ++++ A +S      DID +   PE+VV ID+ +A
Sbjct: 658  -GSNEPVQFVLG-GSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRA 715

Query: 711  AQMGVSMQDLGGTLATLLAEAEINRFTLDGRSYKVIAQVERTYRDNPEWLNNYYVKNAQG 770
            A++G+S++ +  TL  +L   ++  F   G  Y V  + +    +N   L+  Y++ A G
Sbjct: 716  AELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATG 775

Query: 771  EVLPLSTLITVTDRARPRQLNQFQQLNSALI-----SGFPIVSMGEAIDTVRQIAIEETP 825
            E++ L T+  + + A   +L  + +  S  I     +G+   ++G+A+D + Q A E  P
Sbjct: 776  ELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGY---TLGQALDFLDQKAQEILP 832

Query: 826  PGYAFDYSGASRQFIQEGTALWATFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGA 885
               +  YSG S+ F +  +++   F LAL + +LVLAAQFESF +PLV+++TVP+ + G 
Sbjct: 833  NDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGG 892

Query: 886  LIPLFLGWSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRKDKGLTPRQAVEEAAAIRL 945
             + LF+    MNIY+Q+G++ LIG+++K+GILIVEFANQLR D+G+   +A+ +A+A RL
Sbjct: 893  FLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLR-DRGVEFEKAIIDASARRL 951

Query: 946  RPVLMTTAAMVFGMVPLILATGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCVYTLLAKP 1005
            RP+LMT    + G +PLI++TGAG  SR  +G VI  GM   TL TL V+P +Y L++  
Sbjct: 952  RPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGS 1011

Query: 1006 DKA 1008
             +A
Sbjct: 1012 TQA 1014