Pairwise Alignments

Query, 376 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score =  127 bits (320), Expect = 4e-34
 Identities = 113/370 (30%), Positives = 172/370 (46%), Gaps = 49/370 (13%)

Query: 17  VLLLAGYKAFSIYQQIQVFSKPKPAVSVAVATATEQPWQLRVSSVGTLKALQGVNLSLEI 76
           +L   G  A + Y Q     +P PAV+VA A   +   +  V   G + A+Q V++   +
Sbjct: 15  LLTTIGIVAGNAYAQ-----QPPPAVNVAPAAIMDL--RESVDLTGKVVAVQKVDIRARV 67

Query: 77  AGTVKDVQFESGQKVKTGQPLVQL-DSAVESALLE------TAQADLGLAQLDYGRGSQL 129
           +G ++ V FE GQKV  G  L Q+ D A  +AL E       A+A   LA L+  R  +L
Sbjct: 68  SGFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLAVLERDRAQRL 127

Query: 130 VGSQAISKGEFDRLSAQLQKNKATVNQLKAS-------LAKKHIVAPFGGTIGIRQVDVG 182
           + +  +++   D  +AQ++K +A + +LK S       L+   I+APF G +G+  VDVG
Sbjct: 128 IATNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAPFDGVVGLTTVDVG 187

Query: 183 DYLA--SGTVIATLQDLSSLYVDFYIP-------EHAVPKVAPGQPVQVEVSAYPGEQFP 233
             +A  SG+++ TL  L  +YV+F +           V K        V ++   G  +P
Sbjct: 188 ALVAPDSGSLV-TLTRLDPIYVEFPVATSLYFSYRERVEKGEMSSGANVSITLPNGTDYP 246

Query: 234 --GSISAINPKVENSTRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQIVVPEGAITY 291
             G+I  +   V   T  V VRA   NP G LL G   R+ +   +P   + VP+ A+  
Sbjct: 247 EKGTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQSDPQDVLAVPQQAVQR 306

Query: 292 TLYGNSVYAVAEKKTEGGEVEKDADGKPLLIAERRFVETGERRGGLVLVSKGLKAGEQVV 351
              G  V  V            DA+ K     E R V+      G  +V+KGLK GE V+
Sbjct: 307 DQQGAFVMVV------------DANSK----VELRRVDVSRSSRGQAVVAKGLKEGENVI 350

Query: 352 SAGQLKLDNG 361
           + G  K+  G
Sbjct: 351 TEGVGKVRPG 360