Pairwise Alignments

Query, 376 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 320 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  119 bits (297), Expect = 2e-31
 Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 29/327 (8%)

Query: 52  QPWQLR--VSSVGTLKALQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLDSAVESALL 109
           QP ++R  +   GT+     V L   + G +K++ F  G  VK GQ L +++     A L
Sbjct: 4   QPREVREQLDLSGTVAPSATVTLVARVQGVLKEIGFSDGANVKQGQLLFRIEPDTYRAQL 63

Query: 110 ETAQADLGLAQLDYGRGSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAP 169
              QA+L  A+ +  R  QL    A S+    +      +  A  +  + +L    I AP
Sbjct: 64  TYDQAELVNAEQELTRQKQLTADNATSESSLQKAQTTRDQALAKRDMSRINLGYTEIRAP 123

Query: 170 FGGTIGIRQVDVGDYL--ASGTVIATLQDLSSLYVDFYIPEHAVPKVA----PGQPVQVE 223
           F G IG R  DVG+ +  +  T +ATL  +  +YV+F + E    ++     P + V+V 
Sbjct: 124 FSGRIGARSFDVGNLVGASDSTKLATLDRIQPVYVNFTLNERDANRIGLFTKPPRTVRVN 183

Query: 224 VSAYP-GEQFPGSISAINPKVENSTRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQ- 281
           V   P G+    ++  ++ +V++S+  + +RA +AN +  L+PGM   ++V +P  APQ 
Sbjct: 184 VLGAPAGKGEDAALEFVDTRVDSSSGAIRLRADIANKDAHLIPGM--SVEVHIPAGAPQN 241

Query: 282 -IVVPEGAITYTLYGNSVYAVAEKKTEGGEVEKDADGKPLLIAERRFVETGERRGGLVLV 340
            ++VP+ A+     G  V  V                    + E+R V TG   G L  +
Sbjct: 242 VLLVPDTALLREQAGAFVLVVNSAS----------------VIEKRAVVTGGLFGSLRAI 285

Query: 341 SKGLKAGEQVVSAGQLKLDNGTPIAIS 367
           + GL AG+QVV+ G L +  GT + ++
Sbjct: 286 TSGLNAGDQVVTGGALAVAPGTKVQVA 312