Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  273 bits (699), Expect = 2e-77
 Identities = 203/758 (26%), Positives = 347/758 (45%), Gaps = 84/758 (11%)

Query: 1   MFDTLSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSK 60
           M    SI+ +I +  GLCLL    ++I  ++Y  +   QL+S   S+         LQ  
Sbjct: 1   MISLKSIQQRIAITGGLCLLATAGILIGYSVYLASTTQQLVSGRVSQQAQEDALQTLQHL 60

Query: 61  AGEQAVLLQKTFGENLLVVTALADQVKDLRALAAKRALEPGAL---REELNQSLKTTFER 117
            G+ A  ++  F E L     +A       A+    +   G L   R+E+N  L    + 
Sbjct: 61  GGKYAGEIRSEFTEALEAARGMATTF----AVGKSGSTNSGGLQIGRDEVNSILLNVLKS 116

Query: 118 NSKVLGIWLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRAGGEGLNTI--MVEDDL 175
                G +  +EP+ +DG+D  F D +   + + GRF+ YW+R G +G   +  +VE D 
Sbjct: 117 QPDFNGTYSCWEPDAIDGQDFLFTDGQNGNNGQTGRFTPYWTR-GADGKIAVQPLVEYDT 175

Query: 176 TKTTPNLSGTPYNIWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVG 235
               PN  G     WY  PR+T K  +L P    V GKQ+ + T+S+P++VDG   GV G
Sbjct: 176 MDKHPN--GVLKGGWYIGPRETLKESVLGPLPYIVQGKQVWLATLSVPIIVDGRFTGVAG 233

Query: 236 IDIALNTLQAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEI 295
            D  L+ +Q ++     +LF+G   + I+S  GLI A S  P ++G+     +    +  
Sbjct: 234 TDYNLDFVQQISQEVSAKLFDGQGEVAIISDQGLIVAESRFPNLIGQHFQKVLPDGWQTA 293

Query: 296 VQLLASDSPMIREQDHTIRAVY-PVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQ 354
           +  +     + R  D+ +  V+ P++     K W +++ + + ++LA   +L+  +D   
Sbjct: 294 LTSVQKGEELARLDDNGMVVVFAPIELGRTGKPWSMMLKIDKEIVLAKATELKAEMDAQS 353

Query: 355 AAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKD 414
           A   L+ +  G   +LL ++ +W+++  +  PI   A +   I    GD +QR+A+   D
Sbjct: 354 ARSMLQQIGAGVLISLLAVIALWISSRALALPIRKAAQLAGAIQK--GDFSQRMAHQSAD 411

Query: 415 ELGELANWFNRFLDKLQP---------------------------------------TIA 435
           E+G+L+   +R  D LQ                                         ++
Sbjct: 412 EVGQLSASLDRMADSLQEQVHVAERISQGDLAVEVRLASEQDQLGLALRRMVDNLNGLVS 471

Query: 436 QIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATAHDVANSASNAAS 495
           Q++QS       A + + +++  S G       + +++   N+M+      +  AS A +
Sbjct: 472 QVQQSSELINDKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASEANA 531

Query: 496 AARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQ 555
            +R ++ SAR G             L   +  A+ E+    ++   I +++  I  IA Q
Sbjct: 532 LSRNSEHSARSG-----------NELMVSLKAAMQEINQSGLD---ITNIIRAIEEIATQ 577

Query: 556 TNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVE-EIRLVIERIQSGTRGVVA 614
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA R+ ++ +   RL+ E      +G+  
Sbjct: 578 TNLLALNAAIEAARAGEHGRGFAVVADEVRQLAARSAEAAQRSTRLIQESNARTIKGMEI 637

Query: 615 TMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSA 674
           T                  A+AL  I      +S +  +IASA+ QQ++  E+V++ +  
Sbjct: 638 T---------------DDTARALEAIVQGAAQVSQLVDEIASASSQQASGIEQVSQAIGQ 682

Query: 675 IRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           I  V    +  + +S   + +L   A Q +  + +F+V
Sbjct: 683 IDEVVHHNSTNSEQSTQAAQELTQQAQQMIVQVGRFKV 720