Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (648), Expect = 1e-71
 Identities = 146/389 (37%), Positives = 220/389 (56%), Gaps = 11/389 (2%)

Query: 324 DAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKALLVGAAAALLGLLLIWLTATGV 383
           ++  W +V T+P + + A+       LD       L  L V A    +G+ L    A  +
Sbjct: 267 ESMDWFLVGTVPVHEVFAE-------LDAVAQRMMLTTLAVAAIFIFMGIFL----ANSI 315

Query: 384 TRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWFNRFLDKLQPTIAQIKQSITE 443
             PIN +A    D+  GDGDL+QR+     DE+ +L+  FN F++K+  +I  + Q+  E
Sbjct: 316 AMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRE 375

Query: 444 ARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATAHDVANSASNAASAARGADQS 503
            +  A+  S  A  T +  Q Q  +  QV TA N+M AT  ++A++A+ AA  A  A  +
Sbjct: 376 LQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGN 435

Query: 504 AREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNA 563
           A +G +++ ++   I+ LA ++      VE LA  +++IGS+L+ IR I+EQTNLLALNA
Sbjct: 436 ADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNA 495

Query: 564 AIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQA 623
           AIEAARAG+ GRGFAVVADEVRNLA RT  S EEI+ +I ++Q+  +  V+ M + ++  
Sbjct: 496 AIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVT 555

Query: 624 QSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLT 683
                   +A Q L  ISD +  ISD N Q+A+A E+QS V   +N+N+  I  + E  T
Sbjct: 556 HQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTT 615

Query: 684 GQATESAAISSQLNALASQQMKLMDQFRV 712
             A E A  S  L  L+ +  KL+  F++
Sbjct: 616 STAEELADASKSLRELSGRLDKLVGNFKL 644