Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (629), Expect = 2e-69
 Identities = 152/369 (41%), Positives = 221/369 (59%), Gaps = 3/369 (0%)

Query: 346 LQDVLDKAQAAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIAS--GDGD 403
           LQ+ L+    A  L+  +V A   ++GLLL++   + + R +      L  +    G+GD
Sbjct: 307 LQNELNTRYDALVLQREVVIAMCVIMGLLLLYAFCS-IYRALRLTIDSLLGVTRRLGEGD 365

Query: 404 LTQRLAYAKKDELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQ 463
           L+ R+A   KDE+ ++AN  N   D    +I+ + ++  E    A +  A      + M 
Sbjct: 366 LSARVAVVSKDEVADIANGLNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMN 425

Query: 464 VQFREIDQVATASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAE 523
            Q  E +QVATA NEM+A+  DVA +   AA AA  A+ ++R G+ I+ Q+   I +LAE
Sbjct: 426 AQQAETEQVATAINEMTASVADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAE 485

Query: 524 EVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADE 583
           EV  +  +V+ALA++S+ IG V++VI +IA+QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 486 EVELSAQKVQALALHSQSIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADE 545

Query: 584 VRNLAKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDA 643
           VR LA RTQ S EEIR +I+++QS T   V  M + Q +A +       A+ +L  IS  
Sbjct: 546 VRTLASRTQASTEEIRGIIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQG 605

Query: 644 VTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQ 703
           V  I +MN QIASAA QQ AV+E++NRNV  IR  + TL      +A  + +L  +AS  
Sbjct: 606 VERIVEMNTQIASAAVQQHAVSEDINRNVMEIRNSSGTLMLGIDNNAVTADELARVASDM 665

Query: 704 MKLMDQFRV 712
             ++ +F++
Sbjct: 666 RNVVARFKL 674