Pairwise Alignments

Query, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 12/266 (4%)

Query: 40  ITTLFLNRHNTPRDFMPVLVEPALCILASGSK--EVRLADEIFAYDPL---NYLVFSVAM 94
           +  +F+   +     +P + EP L  + SG    E R+ADE +  + +   ++ + +  +
Sbjct: 33  LVEIFVRERSEAHIVVPAVAEPLLVWVLSGEAIVEERVADEAWEANTVGSGDFFLTTSPV 92

Query: 95  PVAGRIIDATPEDPNLSVRINIDPAQLTALIAEAGPMG-VPSRPTSRGMYVDRIDNQLLD 153
           P   R    T  +P + + + +  A L   +AEAG  G +  R  S G   D   + LL+
Sbjct: 93  PYEMRW-QVTSREPFVVMHLYLGLALLERALAEAGGSGAIQLREVSGGR--DEALSALLE 149

Query: 154 AVLRLARLLDTPKDIAMLAPLINREILYRLLRGPQGYRLYEIAVANS-QSHRVSQAITWL 212
            +   A L    +  A+L   + + +   L R        +++  N+  + ++ +    +
Sbjct: 150 QIR--AELTRRGETSALLIQGVAQCVAVHLARHYLDANADDMSARNALPAFKLKRVTQLM 207

Query: 213 NGNYEQPLRIDDLAKAVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMIAEGLEAS 272
             +  +P  + DLA+A+ +S       FK  T  SP QY  QLR+  AR+L++       
Sbjct: 208 EQHLAEPFSLGDLAQAIGMSEYHFSRLFKRATGRSPSQYFIQLRMARARQLLLETERSVI 267

Query: 273 AAGYRVGYESPSQFSREYSRLFGAPP 298
             G  VGY S S FS+ + R  G  P
Sbjct: 268 DIGLEVGYGSASHFSQVFRREVGVAP 293